DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and Acta2

DIOPT Version :10

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_112266.1 Gene:Acta2 / 81633 RGDID:621676 Length:377 Species:Rattus norvegicus


Alignment Length:377 Identity:354/377 - (93%)
Similarity:366/377 - (97%) Gaps:1/377 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCDEE-VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
            ||:|| ..|||.|||||:|||||||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 65

  Fly    65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 129
            ||||||||||||:||||||||||||:|||||||||||||.|||||||||||||||||||||||||
  Rat    66 ILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFN 130

  Fly   130 TPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 194
            .||||||||||||||||||||||||||||||:|.|||||||||||||:|||||||||||||||||
  Rat   131 VPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKIL 195

  Fly   195 TERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCP 259
            |||||||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
  Rat   196 TERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCP 260

  Fly   260 ESLFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPS 324
            |:||||||:|||:.||||||||||||||:|||||||||.||||||||||||||||||||||||||
  Rat   261 ETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPS 325

  Fly   325 TMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            ||||||:||||||||||||||||||||||||||||||||||:||||||||||
  Rat   326 TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 ASKHA_NBD_actin 7..371 CDD:466823 343/363 (94%)
Acta2NP_112266.1 ASKHA_NBD_actin 8..372 CDD:466823 343/363 (94%)

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