DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and Actrt3

DIOPT Version :10

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_083966.1 Gene:Actrt3 / 76652 MGIID:1923902 Length:369 Species:Mus musculus


Alignment Length:368 Identity:171/368 - (46%)
Similarity:255/368 - (69%) Gaps:6/368 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
            :|:||||||.|||.||...|:.|:|:|:||.:..   ....:::..|||:||.:|..|::.||:|
Mouse     8 VVIDNGSGMIKAGLAGTREPQFVYPNILGRSKGH---TADSRQELCVGDQAQERRSFLSISYPVE 69

  Fly    74 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
            .|::::|.|||.:|.|.:...|.:...:.|||:||..|||.|:|:.::::.||....||.|::.|
Mouse    70 RGLISSWGDMEIMWKHIYDYNLNLNASDGPVLVTEPALNPLADRQHISEVFFENLGVPAFYMSAQ 134

  Fly   139 AVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 203
            |||:|:|:|.|||:||:||.|::..|||:|||.|.|.:.:|::||.|||.|||.:|...|.....
Mouse   135 AVLALFAAGFTTGLVLNSGAGITQCVPIFEGYCLSHGVKQLNVAGSDLTSYLMMLLKGDGIMLLR 199

  Fly   204 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFL 268
            |.:|::|.||||..||||:::|.||   ...|:|||.|.||||:.:.:..:.|.|||:||.|..:
Mouse   200 TGDRKVVTDIKENACYVAMNYEDEM---TKDSNLEKIYTLPDGKTVKLHKQLFHCPEALFSPYLV 261

  Fly   269 GMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIVAP 333
            .::|.||.:..:.||||||.|:|...::|.:||||:|.:||:..|:.|::..|||:...::::||
Mouse   262 NVDAPGIDKMCFGSIMKCDTDLRNSFFSNIILSGGSTSFPGLDKRLIKDVAKLAPANTAVQVIAP 326

  Fly   334 PERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            ||||.|||:|||||||||.||.|||:..|::|.||:|||::||
Mouse   327 PERKISVWMGGSILASLSAFQDMWITAAEFEEVGPNIVHQRCF 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 ASKHA_NBD_actin 7..371 CDD:466823 166/361 (46%)
Actrt3NP_083966.1 ASKHA_NBD_actin_Arp-T1-3 6..360 CDD:466848 164/357 (46%)

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