DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and Actrt1

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_082790.1 Gene:Actrt1 / 73360 MGIID:1920610 Length:376 Species:Mus musculus


Alignment Length:369 Identity:180/369 - (48%)
Similarity:243/369 - (65%) Gaps:3/369 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
            |::.|||||:||.|.:|:..||.|..|:||.|:.........:|..:||:|||.....|.|.|||
Mouse    11 AVIFDNGSGLCKVGISGEIEPRHVINSVVGHPKFNIPSARSNRKRYFVGEEAQCMYDGLYLHYPI 75

  Fly    73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
            |.|:||.||||||:|...|..||.|.|.|.||.:||..|||:..|||.|:||||.||.||:|:..
Mouse    76 ERGLVTRWDDMEKLWKDLFEWELGVKPNEQPVFMTEPSLNPQETREKTTEIMFEKFNVPALYLCN 140

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            .||.:|.||...||:||||||||:.|||:||||:|||||.:|.:||||:|::|.::|..:||:|.
Mouse   141 HAVGALCASACITGLVLDSGDGVTCTVPVYEGYSLPHAITKLYVAGRDITEHLTRLLLAKGYTFP 205

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSF 267
            ....:.:|.|||||||.|:|.::.   |..:.....:.|.||||..|.:.:...:.||.||.|..
Mouse   206 CILNKAVVDDIKEKLCTVSLGYKD---TEKNCQQFLRKYTLPDGNTIQMSDHLCQVPEVLFTPDH 267

  Fly   268 LGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIVA 332
            ||:...||.:...||||.||.||:::|:|..||||||||:||:.||:.||:..||.....|||.|
Mouse   268 LGIHDLGISKMVCNSIMNCDTDIQENLFAEIVLSGGTTMFPGLQDRLLKELEDLAFEGTPIKITA 332

  Fly   333 PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            ..:|.||.|||||::.|::||:|||::.:::.|.|..:|.||||
Mouse   333 SSDRCYSAWIGGSVMTSMTTFKQMWVTAEDFKEYGAFVVQRKCF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 178/367 (49%)
Actrt1NP_082790.1 NBD_sugar-kinase_HSP70_actin 8..376 CDD:302596 178/367 (49%)
ACTIN 9..376 CDD:214592 178/367 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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