DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act42A and Actl11

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_080614.1 Gene:Actl11 / 67722 MGIID:1914972 Length:1207 Species:Mus musculus


Alignment Length:370 Identity:149/370 - (40%)
Similarity:225/370 - (60%) Gaps:21/370 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
            :::||:|:|.|:|..|.|.|.::...:|.||.|...:|.    ..||....|.:..:....:|  
Mouse   856 QKMAAIVIDTGTGFTKCGLAQENHVLSVVPSQVQMLQHP----PQGQPQYVVPEHQEGSYSVL-- 914

  Fly    69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
                ..|:|::||.:|.:|.|.||.:|:|.|||..||:.::|::|:.||||:.:|:||.|:.|||
Mouse   915 ----NRGVVSDWDALEVLWQHLFYCKLKVQPEEMAVLVADSPISPRTNREKVAEILFERFHVPAM 975

  Fly   134 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
            ....||:|:|||.|||||:|:.||.|.|:..||..|...|....|||:||.||||||.::|...|
Mouse   976 QTVHQALLTLYAYGRTTGLVVGSGHGTSYVAPIITGDLAPIDTYRLDVAGADLTDYLTQLLLSGG 1040

  Fly   199 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLF 263
            :|.   .:..|:|.|||..||||:|...||  |.:.|.::..:.|||..|||:|:|||.|||:||
Mouse  1041 HSL---PKGGIIRQIKEACCYVAMDTATEM--ARNQSQVQVDFVLPDKHVITLGSERFCCPEALF 1100

  Fly   264 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 328
            ||:.||:...|:.:....||.:.:|..::.|.||.||.||:|:..|..:||::|   |.|..   
Mouse  1101 QPNLLGLNQLGLPQLALLSINRLEVKQQEQLLANVVLEGGSTLINGFPERMRQE---LGPGA--- 1159

  Fly   329 KIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
            .::..|.|..:.|:||||:|...:||.:|::::||:|.||..|::
Mouse  1160 TVLGSPHRAVAAWLGGSIMACRDSFQSLWLTRREYEEEGPWAVYK 1204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 149/370 (40%)
Actl11NP_080614.1 Actin 860..1205 CDD:278451 148/366 (40%)
NBD_sugar-kinase_HSP70_actin 860..1204 CDD:302596 148/364 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.