DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and Actr6

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_080190.1 Gene:Actr6 / 67019 MGIID:1914269 Length:396 Species:Mus musculus


Alignment Length:415 Identity:107/415 - (25%)
Similarity:191/415 - (46%) Gaps:68/415 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VAALVVDNGSGMCKAGFAGDDA---PRAVFPSIVGRPRHQGVMVGMGQKDSYVG---DEAQSKRG 64
            :..||:|||:...|.|::.|..   |...|.|...|.:            ::..   ||.:...|
Mouse     1 MTTLVLDNGAYNAKIGYSHDSVSVIPNCQFRSKTARLK------------TFTANQIDEIKDPSG 53

  Fly    65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
            :..: .|.:.|.:.|||...::|.:.|..|: :|...:..:::||...|..:.:|.|.:|:||.:
Mouse    54 LFYI-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEY 117

  Fly   129 NTPAMYVAIQAVLSLYASGRTTG------------IVLDSGDGVSHTVPIYEGYALPHAILRLDL 181
            .       .||||.:.|...:..            |::|||...:|.||.........||:|:::
Mouse   118 Q-------FQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINV 175

  Fly   182 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---ASSSSLEKSYEL 243
            .|:.||::|.:|::.|  ......|..::..:||.:|||:.||.::|..|   ...:::...|.|
Mouse   176 GGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYRDMDIAKLKGEDNTVMIDYVL 238

  Fly   244 PD------------------------GQVITIGNERFRCPESLFQPSFLGMEACGIHETTYNSIM 284
            ||                        .|::.:.||||..||.||.||.:|::..||.|....||.
Mouse   239 PDFSTIKKGFCKPREEMVLSGKYKFGEQILRLANERFAVPEILFNPSDIGIQEMGIPEAIVYSIQ 303

  Fly   285 KCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILAS 349
            ....:::...:.|.||:||.:::||..:|:..|:..|.|:...:.:|.|.......|.||.:::.
Mouse   304 NLPEEMQPHFFKNIVLTGGNSLFPGFRERVYSEVRCLTPTDYDVSVVLPENPITYSWEGGKLISE 368

  Fly   350 LSTFQQMWISKQEYDESGPSIVHRK 374
            ...|:.|.:::::|:|:|.|:...|
Mouse   369 NDDFEDMVVTREDYEENGHSVCEEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 107/415 (26%)
Actr6NP_080190.1 ACTIN 2..394 CDD:214592 107/414 (26%)
COG5277 2..393 CDD:227602 106/412 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54227
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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