DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and actr6

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001016472.1 Gene:actr6 / 549226 XenbaseID:XB-GENE-5860964 Length:396 Species:Xenopus tropicalis


Alignment Length:409 Identity:106/409 - (25%)
Similarity:190/409 - (46%) Gaps:56/409 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY 70
            :..||:|||:...|.|::....  :|.|:...|.:...:......:.    ||.:...|:..: .
 Frog     1 MTTLVLDNGAYNAKIGYSHGQV--SVIPNCQFRTKTARLKTFTANQI----DEIKDPSGLFYI-L 58

  Fly    71 PIEHGIVTNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 134
            |.:.|.:.|||...::|.:.|..|: :|...:..:::||...|..:.:|.|.:|:||.:.     
 Frog    59 PYQKGYLVNWDVQRQVWDYLFGKEMFQVDFPDSNIIITEPYFNFSSIQESMNEILFEEYQ----- 118

  Fly   135 VAIQAVLSLYASGRTTG------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 187
              .||.|.:.|...:..            |::|||...:|.||..........|:|:::.|:.:|
 Frog   119 --FQAALRINAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPFCRSKKKKEGIIRINVGGKLMT 181

  Fly   188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---ASSSSLEKSYELPD---- 245
            ::|.:|::.|  ......|..::..:||.:|||:.||.::|.||   ...:|:...|.|||    
 Frog   182 NHLKEIISYR--QLQVMDETHVINQVKEDVCYVSTDFYKDMETAKLKGEENSVMVDYVLPDFSTI 244

  Fly   246 --------------------GQVITIGNERFRCPESLFQPSFLGMEACGIHETTYNSIMKCDVDI 290
                                .|::.:.||||..||.||.||.:|::..||.|...:||.....::
 Frog   245 KKGFCKPREEMVFSGKTTAGEQILRLTNERFAVPEILFHPSDIGIQEMGIPEAIVHSINNLPEEM 309

  Fly   291 RKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLSTFQQ 355
            :...|.|.||:||.|::||..:|:..|:..|.|:...:.::.|.......|.||.|::....|:.
 Frog   310 QPHFYKNIVLTGGNTLFPGFRERVFSEVRKLTPTDFDVSVILPENPISYAWEGGKIISENDDFED 374

  Fly   356 MWISKQEYDESGPSIVHRK 374
            |.:::::|:|:|..|...|
 Frog   375 MVVTREDYEENGHIICEEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 106/409 (26%)
actr6NP_001016472.1 ACTIN 2..394 CDD:214592 106/408 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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