DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and actrt2

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001006111.1 Gene:actrt2 / 448563 XenbaseID:XB-GENE-22041684 Length:375 Species:Xenopus tropicalis


Alignment Length:367 Identity:205/367 - (55%)
Similarity:264/367 - (71%) Gaps:2/367 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
            |::.|.|||.||||.:|:|.|.||.||:||....:..|:|.||:..|||:.|.|||.||.|.:||
 Frog    11 AVIFDIGSGNCKAGMSGEDLPTAVVPSVVGHLSDRSAMLGAGQQPYYVGEMAMSKRAILDLVFPI 75

  Fly    73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
            :.|||.:||:|.|||.:.:..||:....||||.||||||||..||.||.:|.||.||.|||||:.
 Frog    76 KEGIVKSWDNMIKIWKYLYKYELKKPSSEHPVFLTEAPLNPLRNRHKMAEIFFENFNVPAMYVSH 140

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            ||.|:|||||.|||||||.|.|::|||.||:|.|||||:.:|.:|||.:|.||||:|||.||:|.
 Frog   141 QANLALYASGLTTGIVLDVGAGITHTVAIYDGVALPHAVSKLPVAGRTITQYLMKLLTENGYNFI 205

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSF 267
            |.|||||||||||||||:|||...|.  ..:...:.|.|.||||.||.|.::.||.||:||.||.
 Frog   206 TAAEREIVRDIKEKLCYIALDPSAEY--ERNPKDITKEYTLPDGNVIKIDSQLFRAPEALFSPSN 268

  Fly   268 LGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIVA 332
            :|:||.|:.....|.|.||.:|||:.|.:|.|||||:|::||..:|:.:|:...||..::||::|
 Frog   269 IGLEAPGVQGLINNIIQKCPIDIRRALLSNVVLSGGSTLFPGFDERVLRELEKKAPDGVQIKVLA 333

  Fly   333 PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
            ..:||||||||.|:|:|:.:|::.||.|.||||.||||||:|
 Frog   334 ATDRKYSVWIGASVLSSMDSFKENWIRKSEYDEFGPSIVHQK 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 205/367 (56%)
actrt2NP_001006111.1 ACTIN 9..375 CDD:214592 204/365 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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