DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and actr1b

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_998537.1 Gene:actr1b / 406681 ZFINID:ZDB-GENE-040426-2695 Length:376 Species:Danio rerio


Alignment Length:370 Identity:200/370 - (54%)
Similarity:276/370 - (74%) Gaps:7/370 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
            :|:|||||:.|||||||..|:..||:.||||:|..||.|..:.|.::|.:|:..||:|:::||:|
Zfish    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDLFIGPKAEEHRGLLSVRYPME 76

  Fly    74 HGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
            ||||.:|:|||:||.:.:..| |:...||||||||||||||..|||:..::.|||||.||:::::
Zfish    77 HGIVKDWNDMERIWQYVYSKEQLQTFSEEHPVLLTEAPLNPSKNRERAAEVFFETFNVPALFISM 141

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            ||||||||:|||||:|||:||||:|.||||||:|:||:|:|:|:||||::.||..:|.:.||.|.
Zfish   142 QAVLSLYATGRTTGVVLDAGDGVTHAVPIYEGFAIPHSIMRVDIAGRDVSRYLRLLLRKEGYDFH 206

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS-YELPDGQVITIGNERFRCPESLFQPS 266
            |:||.|:||.|||:.||::|:.:::     .:...||: |.||||..:.||..|||.||.||:|.
Zfish   207 TSAEFEVVRTIKERACYLSLNPQKD-----ETLETEKAQYTLPDGSTLDIGPARFRAPELLFRPD 266

  Fly   267 FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIV 331
            .:|.|:.||||....:|.|.|:|:|:.|::|.|||||:|:..|..||:..|:..|||..:||||.
Zfish   267 LIGDESEGIHEVLAFAIQKSDMDLRRTLFSNIVLSGGSTLLKGFGDRLLSEVKKLAPKDVKIKIS 331

  Fly   332 APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            ||.||.||.||||||||||.||::||:||:||:|.....:|||.|
Zfish   332 APQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDRARAIHRKTF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 199/368 (54%)
actr1bNP_998537.1 NBD_sugar-kinase_HSP70_actin 5..376 CDD:418402 199/368 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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