DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and actr6

DIOPT Version :10

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_955990.1 Gene:actr6 / 324822 ZFINID:ZDB-GENE-030131-3543 Length:396 Species:Danio rerio


Alignment Length:409 Identity:116/409 - (28%)
Similarity:195/409 - (47%) Gaps:56/409 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY 70
            ::.||:|||:...|.|::.:..  :|.|:...|.:...:......:    .||.:...|:..: .
Zfish     1 MSTLVLDNGAYFAKIGYSHEKV--SVIPNSQFRTKTSRLKTFTANQ----LDEIKDPSGLFYI-L 58

  Fly    71 PIEHGIVTNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 134
            |.:.|.:.|||...|:|.|.|..|: :|...:..:::||...|..:.:|.|.:|:||.:.     
Zfish    59 PFQKGYLVNWDVQRKVWDHLFGKEMFKVDFADTNIVITEPYFNFCSIQESMNEILFEEYQ----- 118

  Fly   135 VAIQAVLSLYASGRTTG------------IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 187
              .|:.|.:.|...:..            ||:|||...:|.||...|..:...|.|:::.|:.||
Zfish   119 --FQSALRINAGSLSAHRYFHENNSELCCIVVDSGFSFTHIVPYCRGRKMKGGICRINVGGKLLT 181

  Fly   188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA---ASSSSLEKSYELPD---- 245
            ::|.:|::.|  ......|..::..:||.:|||:.||.::|..|   ...:::.|.|.|||    
Zfish   182 NHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYKDMEIAQLKGEDNTVMKDYVLPDFSSI 244

  Fly   246 --------------------GQVITIGNERFRCPESLFQPSFLGMEACGIHETTYNSIMKCDVDI 290
                                .|::.:.||||..||.||.||.:|::..||.|...|||.....::
Zfish   245 KKGFCKPLEEMNFTGKYKTGEQILRLTNERFAVPEMLFHPSDIGIQEMGIPEALVNSINNMPEEM 309

  Fly   291 RKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLSTFQQ 355
            :...|.|.||:||.|::||..||:.||:.||||....:.:|.|.......|.||.:||....|::
Zfish   310 QPHFYKNIVLTGGNTLFPGFRDRVYKEVRALAPVEYDVSVVLPNNPICYSWEGGKLLAENPDFEE 374

  Fly   356 MWISKQEYDESGPSIVHRK 374
            |.:::.:|:|:|..|...|
Zfish   375 MAVTRDDYEENGHYICEEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 ASKHA_NBD_actin 7..371 CDD:466823 114/403 (28%)
actr6NP_955990.1 ASKHA_NBD_Arp6 3..386 CDD:466816 113/398 (28%)

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