DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and Actl11

DIOPT Version :10

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001019959.2 Gene:Actl11 / 316000 RGDID:1310036 Length:1218 Species:Rattus norvegicus


Alignment Length:370 Identity:151/370 - (40%)
Similarity:225/370 - (60%) Gaps:21/370 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
            :::||:|:|.|:|..|.|.|.::...:|.||.|...:|.    ..||....|.:..:....:|  
  Rat   867 QKMAAIVIDTGTGFTKCGLAQENHVLSVVPSQVQMLQHP----PQGQPQYVVPEHQEGSYSVL-- 925

  Fly    69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
                ..|:|::||.:|.:|.|.||.:|||.|||..||:.::|::|:.||||:.:|:||.|:.|||
  Rat   926 ----NRGVVSDWDALEVLWQHLFYCKLRVQPEEMAVLVADSPISPRTNREKVAEILFERFHVPAM 986

  Fly   134 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
            ....||:|:|||.|||||:|:.||.|.|:..||..|...|....|||:||.||||||.::|...|
  Rat   987 QTVHQALLTLYAYGRTTGLVVGSGHGTSYVAPIITGDLAPLDTYRLDVAGADLTDYLAQLLMSGG 1051

  Fly   199 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLF 263
            :|   ..:..|||.|||..||||:|...||  |.:.|.::..:.|||..|||:|:|||.|||:||
  Rat  1052 HS---PPKGGIVRQIKEACCYVAMDTTTEM--ARNQSQVQVDFVLPDKHVITLGSERFCCPEALF 1111

  Fly   264 QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 328
            ||:.||:...|:.:....||.:.:|..::.|.||.||.||:|:..|..:||::|   |.|..   
  Rat  1112 QPNLLGLNQLGLPQLALLSISRLEVKQQEQLLANVVLEGGSTLINGFPERMRQE---LGPGA--- 1170

  Fly   329 KIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 373
            .::..|.|..:.|:||||:|...:||.:|:|::||:|.||..:::
  Rat  1171 TVLGSPHRAVAAWLGGSIMACRDSFQSLWLSRREYEEEGPWAIYK 1215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 ASKHA_NBD_actin 7..371 CDD:466823 151/363 (42%)
Actl11NP_001019959.2 PHA03247 <200..485 CDD:223021
ASKHA_ATPase-like 867..1215 CDD:483947 151/368 (41%)
Blue background indicates that the domain is not in the aligned region.

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