DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and Actrt1

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001013983.1 Gene:Actrt1 / 302796 RGDID:1359559 Length:376 Species:Rattus norvegicus


Alignment Length:372 Identity:182/372 - (48%)
Similarity:244/372 - (65%) Gaps:9/372 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
            |::.|||||:||.|.:|:..||.|..|:||.|:.........:|..:||:|||.....|.|.|||
  Rat    11 AVIFDNGSGLCKVGISGEIVPRHVINSVVGHPKFNIPSARSNRKRYFVGEEAQCMYDGLYLHYPI 75

  Fly    73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
            |.|:||.||||||:|...|..||.|.|.|.||.:||..|||:..|||.|:||||.||.||:|:..
  Rat    76 ERGLVTRWDDMEKLWKDLFEWELGVKPNEQPVFMTEPSLNPRETREKTTEIMFEKFNVPALYLCN 140

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            .||.:|.||...||:||||||||:.||||||||:||.||.:|.:||||:|::|.::|..:||:|.
  Rat   141 HAVGALCASACITGLVLDSGDGVTCTVPIYEGYSLPRAITKLYVAGRDITEHLTRLLLAKGYTFP 205

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS---YELPDGQVITIGNERFRCPESLFQ 264
            ....:.:|.|||||||.|:      ..:..|....::|   |:||||..|.:.:...:.||.||.
  Rat   206 CILNKAVVDDIKEKLCTVS------WGSKDSEKCYQRSLSEYKLPDGNTIQMSDHLCQVPEVLFT 264

  Fly   265 PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 329
            |..||:...||.:...|||||||.||:::|:|..|||||||::||:.||:.||:..||.....||
  Rat   265 PEHLGIHDLGISKMVCNSIMKCDTDIQENLFAEIVLSGGTTLFPGLQDRLLKELEVLAFEGTPIK 329

  Fly   330 IVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            |.|.|:|.||.|||||::.||:||:|||::.:::.|.|..:|.||||
  Rat   330 ITASPDRCYSAWIGGSVMTSLTTFKQMWVTAEDFKEYGAFVVQRKCF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 180/370 (49%)
Actrt1NP_001013983.1 ACTIN 9..376 CDD:214592 180/370 (49%)
NBD_sugar-kinase_HSP70_actin 11..376 CDD:302596 180/370 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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