DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and Actrt2

DIOPT Version :10

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001013959.1 Gene:Actrt2 / 298671 RGDID:1359657 Length:377 Species:Rattus norvegicus


Alignment Length:369 Identity:184/369 - (49%)
Similarity:259/369 - (70%) Gaps:2/369 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPI 72
            :::.|||||:||||.:|:..||.|..|:||.|:.:....|..||..:||:||..|:..|.|:.||
  Rat    11 SVIFDNGSGLCKAGLSGEIGPRHVTSSVVGYPKFKASPTGACQKKYFVGEEALFKQETLRLQSPI 75

  Fly    73 EHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
            |.|::|:|||:||:|.|.|..||.|.|.|.|||:||..|||:.||||..::|||||..||.|::.
  Rat    76 ERGLITSWDDIEKLWRHLFEWELGVKPSERPVLMTEPSLNPRENREKTAEVMFETFEVPAFYLSD 140

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            ||||:||:|...||:|:||||||:.||||:|||:||||:.:|.:||:|:|:.|.::|...|.:|.
  Rat   141 QAVLALYSSACVTGLVVDSGDGVTCTVPIFEGYSLPHAVSKLFVAGKDITELLTRLLLASGRAFP 205

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSF 267
            ...::.:|.|||||||||||:.|:|::..|  ..:.:.|:||||.||.||::.::.||.||.|..
  Rat   206 CPLDKALVDDIKEKLCYVALEPEEELSRRA--EDVLREYKLPDGNVIYIGDQLYQAPEVLFSPDQ 268

  Fly   268 LGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIVA 332
            ||....|:.:...|||.|||.||:|.|:...|||||:|::.|:.||:.||:..||...:.|||.|
  Rat   269 LGTHGPGLAQMASNSIAKCDADIQKTLFGEIVLSGGSTLFQGLDDRLLKELEQLASKGVPIKITA 333

  Fly   333 PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            ||:|.:|.|||.||:.|||:|:||||:..::.|.|.|:|.|:||
  Rat   334 PPDRWFSTWIGASIVTSLSSFKQMWITAADFKEFGVSVVQRRCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 ASKHA_NBD_actin 7..371 CDD:466823 180/362 (50%)
Actrt2NP_001013959.1 ASKHA_NBD_actin_Arp-T1-3 10..368 CDD:466848 178/358 (50%)

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