DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and Actr1a

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_006231532.1 Gene:Actr1a / 294010 RGDID:1307025 Length:396 Species:Rattus norvegicus


Alignment Length:390 Identity:197/390 - (50%)
Similarity:279/390 - (71%) Gaps:27/390 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ------------- 60
            :|:|||||:.|||||||..|:..||:.||||:|..||.|..:.|.::|.:|:             
  Rat    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEVIPSPTEEASGLQ 76

  Fly    61 -------SKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANR 117
                   ..||:|:::||:|||||.:|:|||:||.:.: .::|:...||||||||||||||:.||
  Rat    77 RAYLSTTEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKNR 141

  Fly   118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 182
            |:..::.|||||.||:::::||||||||:|||||:||||||||:|.||||||:|:||:|:|:|:|
  Rat   142 ERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDIA 206

  Fly   183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS-YELPDG 246
            |||::.:|...|.:.||.|.:::|.|||:.|||:.||::::.:::     .:...||: |.||||
  Rat   207 GRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKERACYLSINPQKD-----ETLETEKAQYYLPDG 266

  Fly   247 QVITIGNERFRCPESLFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 311
            ..|.||..|||.||.||:|..:|.|:.||||....:|.|.|:|:|:.|::|.|||||:|::.|..
  Rat   267 STIEIGPSRFRAPELLFRPDLIGEESEGIHEVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFG 331

  Fly   312 DRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            ||:..|:..|||..:||:|.||.||.||.||||||||||.||::||:||:||:|.|...:|||.|
  Rat   332 DRLLSEVKKLAPKDVKIRISAPQERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF 396

  Fly   377  376
              Rat   397  396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 196/388 (51%)
Actr1aXP_006231532.1 NBD_sugar-kinase_HSP70_actin 5..396 CDD:418402 196/388 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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