DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and Actl9b

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001013915.1 Gene:Actl9b / 292516 RGDID:1359476 Length:411 Species:Rattus norvegicus


Alignment Length:375 Identity:155/375 - (41%)
Similarity:235/375 - (62%) Gaps:11/375 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-RPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
            :::.:|:|.|:|:||.||||...|..:..:||| :|:.:..| ...:.:.::| ||...|..|||
  Rat    43 KMSGVVIDMGTGICKMGFAGQTRPTYIVRNIVGCQPKRRTTM-EQPKMEMFIG-EAAHARPELTL 105

  Fly    69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
            .:|:.:|||.:|:..|.||.|...|:||:..::||:|.|:.|.||.:||||:.::.||:.::||:
  Rat   106 MHPVRNGIVVDWEAAEFIWRHILENDLRLDTQDHPLLFTDPPFNPASNREKLVEVAFESLHSPAI 170

  Fly   134 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLM-KILTER 197
            |||.|:|||:||:||..|:|:|:|.|||:|||:::||.||..|.|:||||..||.:|. |||.. 
  Rat   171 YVASQSVLSVYANGRVNGLVVDTGHGVSYTVPVFQGYNLPSGIQRMDLAGHYLTKFLAEKILRS- 234

  Fly   198 GYSFTTTAE-REIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPES 261
              ||....| .:.:.:||::.|||||||::|.  ........:..:|||||:||:|.|.|:|||.
  Rat   235 --SFAVKKEDMDTMENIKQQYCYVALDFQKEQ--GRPDEKFRRCLKLPDGQMITVGKELFQCPEL 295

  Fly   262 LFQ-PSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPST 325
            ||. |...|..:.|:.....:|:.....::|.|:..|.:|.||::::.|...|.:.|:.......
  Rat   296 LFHPPDTSGPSSLGLPSMVEHSLSTVPQELRADMEQNVLLCGGSSLFTGFEGRFKTELLRRLGPE 360

  Fly   326 MKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
            ..:.:||...|..||||||||||||..||..|:.:::|:|.||.||.|||
  Rat   361 AHVVVVAQANRNLSVWIGGSILASLCAFQTRWVLREQYEEHGPDIVLRKC 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 155/375 (41%)
Actl9bNP_001013915.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
NBD_sugar-kinase_HSP70_actin 45..410 CDD:302596 153/371 (41%)
Actin 47..411 CDD:278451 155/371 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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