DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and Actr2

DIOPT Version :10

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001009268.1 Gene:Actr2 / 289820 RGDID:1310826 Length:394 Species:Rattus norvegicus


Alignment Length:380 Identity:177/380 - (46%)
Similarity:250/380 - (65%) Gaps:15/380 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
            :|.|||:|..|.|:||.:.|..:||::||||  |....:..:..||..|||||...|.:|.:.||
  Rat     9 VVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYP 73

  Fly    72 IEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 135
            :|:|||.|||||:.:|.:||..| |.:......:||||.|:||..||||:.::||||:....:||
  Rat    74 MENGIVRNWDDMKHLWDYTFGPEKLNIDTRSCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYV 138

  Fly   136 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200
            ||||||:|||.|..||:|:||||||:|..|:|||::|||...|||:||||:|.||:|:|..|||:
  Rat   139 AIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYA 203

  Fly   201 FTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQP 265
            |..:|:.|.||.||||||||..:.|||...|..::.|.:||.||||::|.:|.|||..||:||||
  Rat   204 FNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQP 268

  Fly   266 SFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL--------- 321
            ..:.:|..|:.|..:|:|...|:|.|.:.|.:.|||||:|||||:..|:::|:..|         
  Rat   269 HLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGD 333

  Fly   322 --APSTMKIKIVAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESGPSIVHR 373
              ..|..||:|..||.||:.|::||::||. :......|:::|||.|.|..::.:
  Rat   334 VEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 ASKHA_NBD_actin 7..371 CDD:466823 177/376 (47%)
Actr2NP_001009268.1 ASKHA_NBD_Arp2 7..388 CDD:466821 177/378 (47%)

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