DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act42A and Actr2

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_017454617.1 Gene:Actr2 / 289820 RGDID:1310826 Length:399 Species:Rattus norvegicus


Alignment Length:385 Identity:176/385 - (45%)
Similarity:251/385 - (65%) Gaps:20/385 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP------RHQGVMVGMGQK-DSYVGDEAQSKRGIL 66
            :|.|||:|..|.|:||.:.|..:||::||||      :...:.:...:| |..|||||...|.:|
  Rat     9 VVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTTKVGNIEIKNNKKMDLMVGDEASELRSML 73

  Fly    67 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
            .:.||:|:|||.|||||:.:|.:||..| |.:......:||||.|:||..||||:.::||||:..
  Rat    74 EVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRSCKILLTEPPMNPTKNREKIVEVMFETYQF 138

  Fly   131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
            ..:||||||||:|||.|..||:|:||||||:|..|:|||::|||...|||:||||:|.||:|:|.
  Rat   139 SGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLL 203

  Fly   196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPE 260
            .|||:|..:|:.|.||.||||||||..:.|||...|..::.|.:||.||||::|.:|.|||..||
  Rat   204 LRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPE 268

  Fly   261 SLFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL---- 321
            :||||..:.:|..|:.|..:|:|...|:|.|.:.|.:.|||||:|||||:..|:::|:..|    
  Rat   269 ALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLER 333

  Fly   322 -------APSTMKIKIVAPPERKYSVWIGGSILAS-LSTFQQMWISKQEYDESGPSIVHR 373
                   ..|..||:|..||.||:.|::||::||. :......|:::|||.|.|..::.:
  Rat   334 VLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 176/385 (46%)
Actr2XP_017454617.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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