DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and arp8

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_593450.2 Gene:arp8 / 2543563 PomBaseID:SPAC664.02c Length:662 Species:Schizosaccharomyces pombe


Alignment Length:426 Identity:72/426 - (16%)
Similarity:151/426 - (35%) Gaps:130/426 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 LKYPIEHGIVTNWD---------DMEKIWHHTFYNELRVAP---EEHPVLLTEAPLNPKANREKM 120
            |.|||:.|:....|         |:.:|:.::..:.|::..   .::.|:.....|..:...||:
pombe   240 LFYPIKSGVFNESDYASSQQLLADIYEIFKYSITSLLQIPVSQLSQYSVIFIVPDLYDRVYVEKI 304

  Fly   121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 185
            ..|:|...:.....:..:::.:.:.:|.:...|:|.|...:....:.||..:|::.::::..|.|
pombe   305 LDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRIKINYGGDD 369

  Fly   186 LTDYLMKILTERGYSF-----TTTAEREIVRDIKEKLC--------------------------- 218
            :|...||:|....:.:     .|..:..:...:|.|.|                           
pombe   370 ITLLFMKLLMRSHFPYQDIDLKTPYDWSLANALKIKYCGLSEATYNVQLNSFFSRTPDKGTRKFT 434

  Fly   219 YVALD--------------FEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLG 269
            :.:||              ||.|       :.|...|.|....|....|:. ..||||.|.:.|.
pombe   435 FKSLDETMLAPLGFFRPDIFENE-------NKLHDRYTLFPVPVDVYDNQP-NNPESLAQTTLLQ 491

  Fly   270 MEA-----------------------------------CG-------------------IHETTY 280
            :..                                   ||                   |:::.:
pombe   492 ISTPISNIKANGKDDEEKKEESDLVTPSVKFKPPRVVYCGSLAAPEIKNEKLIYPLDDAINQSIF 556

  Fly   281 NSIMKCDVDI----RKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIVAPP---ERKY 338
            ::   ||.::    .|:||::.::.||...:||.|..:::.|.:...:...|.::.||   :.::
pombe   557 SA---CDGNLSDEKAKNLYSSILIVGGAGQFPGFAHLLEERIHSKRANIPTISVIPPPRSMDAQF 618

  Fly   339 SVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
            ..|.|..|...:....::||...::...|..::..|
pombe   619 VAWKGACIYNRIRIVSELWIKNSDWKMLGSRVLQYK 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 72/426 (17%)
arp8NP_593450.2 COG5277 91..656 CDD:227602 72/426 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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