DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act42A and alp5

DIOPT Version :10

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_595820.1 Gene:alp5 / 2541318 PomBaseID:SPBP23A10.08 Length:433 Species:Schizosaccharomyces pombe


Alignment Length:439 Identity:130/439 - (29%)
Similarity:204/439 - (46%) Gaps:82/439 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 68
            :||:|:|:|.||...:.||:|:|.|:.|.||..|.......:.|    :.|:   .:|..| :.:
pombe     9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNPG-MEI 65

  Fly    69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
            |..|.:|.|.|||....:|.:....:|:..|.|||:|:||...||..||.|..:.|||:...||.
pombe    66 KNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPAT 130

  Fly   134 YVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 198
            |:|.|...:.:|||:.|..::|.|...|....||:|:.|.........:|..:.|.|.:.|.::.
pombe   131 YLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHFSGNAINDILAQTLRDKN 195

  Fly   199 Y-------------------------------SFTTTAEREIVRDIKEKLCYVA-LDFEQEMATA 231
            :                               |:.....:.:..:.||:...:: :.|..|...|
pombe   196 FEVMPKYLVKSKNPVEIGQPANCELRPRDTTDSYHQFQVQRVYDEWKEECALISDVPFSSETTIA 260

  Fly   232 ASSSSLEKSYELPDGQVITIGNERFRCPESLFQP-----------------------------SF 267
                  |..:|.|||..:..|.||::.||.||.|                             :.
pombe   261 ------ESEFEFPDGSRMMFGAERYQIPEHLFVPGSDEEMNEEPSKPIEQTENNEVSQQDSSVTN 319

  Fly   268 LGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIVA 332
            ......||.:...|.|.:||||||..|..|.::.|||::..|.:.|:|.|::.|.|.: ::||.|
pombe   320 TSSRILGIPQLFQNCISECDVDIRASLLNNVIVCGGTSLMQGFSLRLQNELSKLYPGS-RLKIHA 383

  Fly   333 P---PERKYSVWIGGSILASLSTFQQMWISKQEYDESGP---SIVHRKC 375
            .   .||.|:.|:|||||:||.||.|:|||:|||:|.|.   :::.::|
pombe   384 SGHVVERSYASWLGGSILSSLGTFHQLWISRQEYEEHGSDRLALIEKRC 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 ASKHA_NBD_actin 7..371 CDD:466823 127/430 (30%)
alp5NP_595820.1 ASKHA_NBD_Arp4_ACTL6-like 8..421 CDD:466846 128/426 (30%)

Return to query results.
Submit another query.