DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and arp1

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_596704.1 Gene:arp1 / 2539676 PomBaseID:SPBC1347.12 Length:379 Species:Schizosaccharomyces pombe


Alignment Length:369 Identity:178/369 - (48%)
Similarity:257/369 - (69%) Gaps:2/369 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 73
            :.:|||||..||||||||.|:.:||:.|||.:|:.||....|||.:||.|||:.||:|.::.|||
pombe    12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIE 76

  Fly    74 HGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAI 137
            .||:.||.|||:||.:.:.: :|...|||||:||||.||....|:||:.:..:||.|.||:..::
pombe    77 RGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSL 141

  Fly   138 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFT 202
            |.||:||||.|||||||:.|||::|:||||:|:::|.||.:.::.|||:||||...|.:.|:...
pombe   142 QPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELV 206

  Fly   203 TTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSF 267
            ::||:||||:||||.||||.||..|:.:.........:|:|||.|.||:|.|.|..||.||.|..
pombe   207 SSAEKEIVREIKEKCCYVASDFRSEIESWTEHKPQIHTYQLPDNQTITLGTECFSAPEVLFNPEM 271

  Fly   268 LGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIVA 332
            :|.||.|:|...:.||:..|:|:|..||:|.|||||:|:..|..:|...|:.|::....::||.|
pombe   272 MGSEASGLHIQLFKSILLSDIDLRSTLYSNIVLSGGSTLLRGFGERFISELRAISGKKNQVKIYA 336

  Fly   333 PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            .|||.::.|:|||||||||||:::.|:.:|| ::..:::.|:.|
pombe   337 SPERMHNAWLGGSILASLSTFRRLLITSEEY-KNDQNVIFRRRF 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 177/367 (48%)
arp1NP_596704.1 NBD_sugar-kinase_HSP70_actin 3..378 CDD:302596 177/366 (48%)
ACTIN 9..367 CDD:214592 174/354 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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