DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and Actr3b

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_001004365.1 Gene:Actr3b / 242894 MGIID:2661120 Length:418 Species:Mus musculus


Alignment Length:417 Identity:152/417 - (36%)
Similarity:225/417 - (53%) Gaps:61/417 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VVDNGSGMCKAGFAGDDAPRAVFPS---------IVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 65
            |||.|:|..|.|:||:..|:.:.||         :|.:.:.: |:.|:...|.::||||..|...
Mouse     9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVVDQAQRR-VLRGVDDLDFFIGDEAIDKPTY 72

  Fly    66 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
            .| |:||.||||.:||.||:......:..||..||:|..|:||.|||...|||.:.:||||:||.
Mouse    73 AT-KWPIRHGIVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYLAEIMFESFNV 136

  Fly   131 PAMYVAIQAVLSLYAS-------GRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 187
            |.:|:|:||||:|.||       .|| ||||:||||||:|.:|:.|||.:...|..:.:||||:|
Mouse   137 PGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT 201

  Fly   188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA-------------TAASSSSLEK 239
            .::.::|.||..........|..:.||||.||:..|..:|.|             |..::.:.:|
Mouse   202 YFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVREFAKYDVDPRKWIKQYTGINAINQKK 266

  Fly   240 SYELPDGQVITIGNERFRCPESLFQPSFLG---MEACGIHETTYNSIMKCDVDIRKDLYANTVLS 301
            .       :|.:|.|||..||..|.|.|..   ||:  |.:.....|..|.:|:|:.||.|.|||
Mouse   267 F-------IIDVGYERFLGPEIFFHPEFANPDFMES--ISDVVDEVIQSCPIDVRRPLYKNVVLS 322

  Fly   302 GGTTMYPGIADRMQKEIT----------------ALAPSTMKIKIVAPPERKYSVWIGGSILASL 350
            ||:||:.....|:|:::.                .:.|..:::::|....::|:||.|||:|||.
Mouse   323 GGSTMFRDFGRRLQRDLKRVVDARLKLSQELSGGRIKPKPVEVQVVTHHMQRYAVWFGGSMLAST 387

  Fly   351 STFQQMWISKQEYDESGPSIV-HRKCF 376
            ..|.|:..:|::|:|.||||. |...|
Mouse   388 PEFFQVCHTKKDYEEYGPSICRHNPVF 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 151/415 (36%)
Actr3bNP_001004365.1 COG5277 1..410 CDD:227602 150/411 (36%)
PTZ00280 2..417 CDD:240343 152/417 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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