DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Act42A and actl6a

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_005165974.1 Gene:actl6a / 192313 ZFINID:ZDB-GENE-020419-36 Length:455 Species:Danio rerio


Alignment Length:448 Identity:160/448 - (35%)
Similarity:236/448 - (52%) Gaps:78/448 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG--RPRHQG--VMVGMGQKDSYVG-------D 57
            :||.|||.|.||...:||:||:|.|:|.||:::|  ..|..|  .|...|:|....|       :
Zfish     9 DEVGALVFDMGSYSVRAGYAGEDCPKADFPTVIGVTLDREDGSTPMETDGEKGKQSGTTYFIDTN 73

  Fly    58 EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
            :.:..|..:.:..|:::|::.:||..:.|..||:....:..|..||||::||..|.:|.|||:|:
Zfish    74 QLRVPRESMEVMSPLKNGMIEDWDSFQAILDHTYKMHFKSQPGLHPVLMSEASWNTRAKREKLTE 138

  Fly   123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT--VPIYEGYALPHAILRLDLAG-- 183
            :|||.:|.||.::...||||.:|:||:||:||||  |.:||  :|:::||.|...|::..|||  
Zfish   139 LMFEHYNIPAFFLCKSAVLSAFANGRSTGLVLDS--GATHTTAIPVHDGYVLQQGIVKSPLAGDF 201

  Fly   184 -----RDLTDYL-----------MKILTERGY-----------SFTTTAEREIVRD-------IK 214
                 |:|...|           .|:....||           :|...:.::.||:       .|
Zfish   202 MSMQCRELFQELGVEIVPPYMIASKVRPFEGYDSQLIKMFESNNFIMFSLKDSVREGTPASWKKK 266

  Fly   215 EKL-----------CYVAL-DFEQEMATAASSSSLEK--------SYELPDGQVITIGNERFRCP 259
            |||           |...: ||:..:...:.|...|:        .||||:|.....|.||.:.|
Zfish   267 EKLPQVTRSWHNYMCNTVIQDFQASVLQVSDSPYDEQVAAQMPTVHYELPNGYNCDFGAERLKIP 331

  Fly   260 ESLFQPS----FLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 320
            |.||.||    ..|....|:......|:..||:|||..||.:.|::||.|:..|..||:.:|::.
Zfish   332 EGLFDPSNAKGLSGNTMLGVGHVVTTSVGMCDIDIRPGLYGSVVVTGGNTLIQGFTDRLNRELSQ 396

  Fly   321 LAPSTMKIKIVA---PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
            ..|.:|::|::|   ..||::|.||||||||||.||||||||||||:|.|...|.|||
Zfish   397 KTPPSMRLKLIANNTTVERRFSAWIGGSILASLGTFQQMWISKQEYEEGGKQCVDRKC 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 160/448 (36%)
actl6aXP_005165974.1 NBD_sugar-kinase_HSP70_actin 10..454 CDD:302596 158/445 (36%)
Actin 11..455 CDD:278451 159/446 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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