DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and arp-11

DIOPT Version :10

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_501314.2 Gene:arp-11 / 183628 WormBaseID:WBGene00016793 Length:384 Species:Caenorhabditis elegans


Alignment Length:405 Identity:84/405 - (20%)
Similarity:157/405 - (38%) Gaps:96/405 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 MCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWD 81
            |.:.|.||:..||.:.                  :..||.||.:               ::|: |
 Worm     1 MFRIGCAGEITPRHII------------------RTEYVDDEGK---------------LITS-D 31

  Fly    82 DM------------EKIWHHTFYNELRV------APEEHPVLLTEAPLNPKANREKMTQIMFETF 128
            ::            .:.:....|..||:      ||.:.||:..|:....::.|..:|:|:.|..
 Worm    32 ELLALNNRKTATKSTEYYEEILYKFLRIVFLKVLAPTDRPVIFVESIFMSESLRNTITKIVVEKI 96

  Fly   129 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI-LRLDLAGRDLTDYLMK 192
            ...::......|.:.:.......:|:|.|......|||.||..:.:.. ....:.||.|...:.:
 Worm    97 RCKSLMFMPSHVCATFPFNTQNALVVDIGHSECIAVPIIEGVTMLNEFESARSICGRQLERRVRE 161

  Fly   193 ILTERGYSFTTTAEREIV-----RDIKE-------KLCYVALDFEQEMATAASSSSLEKSYELPD 245
            .:.:.|.......||..:     :||..       .|..:.||.|:    |.:.:..|.|.|...
 Worm   162 QMEKYGQIAELNGERRAITENDWQDIDACKLIETLSLSLICLDKER----AENWTKWEASEEGEK 222

  Fly   246 GQVITIGNER--------FRCPESLFQPSFLGMEACGIHETTYN---------SIMKCDVDIRKD 293
            ..:.|:..||        |..|..:|:.|........::.|:::         .:.||.:|:||.
 Worm   223 PDIETLCKERLFPNNGKIFVVPPVVFETSTEIFFNENLNPTSFDLSLPKLLHKLVSKCPIDLRKK 287

  Fly   294 LYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIVAP----PERK----YSVWIGGSILAS 349
            |:.|.:|:||.:..||:..|:::||..: ..:..||.::..    .|.|    :..|:|.|:|.|
 Worm   288 LFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIKNTPLFVSWLGASLLGS 352

  Fly   350 L-STFQQMWISKQEY 363
            | .|.::..::.:|:
 Worm   353 LRETIERKSLTLEEW 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 ASKHA_NBD_actin 7..371 CDD:466823 84/405 (21%)
arp-11NP_501314.2 ASKHA_ATPase-like 3..378 CDD:483947 83/403 (21%)

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