DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and F42C5.9

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_501169.1 Gene:F42C5.9 / 177504 WormBaseID:WBGene00018349 Length:552 Species:Caenorhabditis elegans


Alignment Length:366 Identity:108/366 - (29%)
Similarity:185/366 - (50%) Gaps:19/366 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LVVDNGSGMCKAGFAGDD--APRAVFPSIVGRPRHQGVMVGMGQKDSY---VGDEAQSKRGILTL 68
            |:::.||...:||....:  .|::.||:|..|.....:.||   :|:|   :.......|.|...
 Worm   181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVG---EDAYRPEIRHNGDFVRPISAT 242

  Fly    69 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN-PKANREKMTQIMFETFNTPA 132
            ...:|...:..  |:.|........||:|.|.::.|||: .|.| |.....::.||..|.....:
 Worm   243 DPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLS-IPQNIPTVLIGELLQICLEDIKFQS 304

  Fly   133 MYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 197
            ..:..|..|.|||...|||:|:|.|:.| :.||:.:||.:..||..:....:.:.|.|...|:..
 Worm   305 AGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAH 368

  Fly   198 G---YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS--SLEKSYELPDGQV-ITIGNERF 256
            .   |:|.:..|:.|:|...|:..||..|:::|..:....:  ||:.....|..|. ..|.|.||
 Worm   369 NKGLYAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRF 433

  Fly   257 RCPESLFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL 321
            .|.|.||:|...|::..|:|:..:.:|::|.:|.|:.||.|..|:||.::.||||:::::|::.:
 Worm   434 LCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTV 498

  Fly   322 APSTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQE 362
            .|:|:..::...|.|..:.::|..|:||.|||:...||.|:
 Worm   499 VPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 108/366 (30%)
F42C5.9NP_501169.1 ACTIN 179..552 CDD:214592 108/366 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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