DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and arp-1

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_497108.2 Gene:arp-1 / 175162 WormBaseID:WBGene00013168 Length:374 Species:Caenorhabditis elegans


Alignment Length:378 Identity:200/378 - (52%)
Similarity:270/378 - (71%) Gaps:9/378 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DEEVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
            |.:|.|   :|:|||||:.||||||:..|:..|.:.||||::..||.|....|.::|.:|:|.||
 Worm     2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRG 66

  Fly    65 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 128
            :.:::||:|||||.||.||||||.:.| .::|::.|||||||||:|||||..|||:..:|.||||
 Worm    67 LFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETF 131

  Fly   129 NTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 193
            |.||:|:.:||||||||:|||||:||||||||:|.|||.:|:|:.|||.|:||||||:|:||..:
 Worm   132 NVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVL 196

  Fly   194 LTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRC 258
            |...||.|..:.|.||||::||..||:|||     .|...::|::.||.|||...|.|.|..||.
 Worm   197 LRREGYEFHRSNEFEIVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRA 256

  Fly   259 PESLFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP 323
            ||.||:|..:|.|..|:......||||||||:|:.||:|.|||||||::.|..||:..|:..:||
 Worm   257 PEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAP 321

  Fly   324 STMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
            :..||:|.|..||....||||||:|||.||::||:.|:||::.|.|.:|::.|
 Worm   322 ADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 199/376 (53%)
arp-1NP_497108.2 NBD_sugar-kinase_HSP70_actin 4..374 CDD:302596 198/374 (53%)
ACTIN 8..374 CDD:214592 196/370 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 1 1.000 - - FOG0000057
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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