DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and arx-1

DIOPT Version :10

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_491066.1 Gene:arx-1 / 171857 WormBaseID:WBGene00000199 Length:425 Species:Caenorhabditis elegans


Alignment Length:420 Identity:154/420 - (36%)
Similarity:227/420 - (54%) Gaps:56/420 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGMGQKDS 53
            |...::.|.|:|||:|..|.|:||:..|:.:.||.      |.....|.      |..|:...|.
 Worm     1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLDF 65

  Fly    54 YVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 117
            ::||||.|.... .|:||||.||||.:||.||:.|....:..||..||:|..||||.|||...||
 Worm    66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENR 130

  Fly   118 EKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPH 174
            |...:||||:||.|.:|:|:||||:|.||..:        ||:|:||||||:|.:|:.:||.:..
 Worm   131 EYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGS 195

  Fly   175 AILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA---TAAS--- 233
            .|..:.:||||:|.::..:|.:|.::.......|:.:.||||.|||..|..:|..   |.|:   
 Worm   196 CIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKYDTDAAKWL 260

  Fly   234 ------SSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGME-ACGIHETTYNSIMKCDVDIR 291
                  :|..:|.:.      :.:|.|||..||..|.|.|...| ...|.:|....|.:|.:|:|
 Worm   261 RTYDGINSITKKPFN------VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVR 319

  Fly   292 KDLYANTVLSGGTTMYPGIADRMQKEITALA----------------PSTMKIKIVAPPERKYSV 340
            :.||.|.|||||:||:...|.::|:::..|:                |..:.:::::...::|:|
 Worm   320 RGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAV 384

  Fly   341 WIGGSILASLSTFQQMWISKQEYDESGPSI 370
            |.|||:|||.|.|.|:..:|.||.|.||||
 Worm   385 WFGGSMLASTSEFYQVSHTKAEYMERGPSI 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 ASKHA_NBD_actin 7..371 CDD:466823 153/414 (37%)
arx-1NP_491066.1 ASKHA_NBD_Arp3-like 8..417 CDD:466822 153/413 (37%)

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