DRSC/TRiP Functional Genomics Resources

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Protein Alignment Act42A and actr3b

DIOPT Version :9

Sequence 1:NP_523625.1 Gene:Act42A / 35526 FlyBaseID:FBgn0000043 Length:376 Species:Drosophila melanogaster
Sequence 2:XP_005162538.1 Gene:actr3b / 100038776 ZFINID:ZDB-GENE-070424-10 Length:419 Species:Danio rerio


Alignment Length:417 Identity:145/417 - (34%)
Similarity:218/417 - (52%) Gaps:61/417 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
            |:|.|:|..|.|:||:..|:.:.|:.        ||....:.::.|:...|.::||||..|....
Zfish    10 VIDCGTGYTKIGYAGNTEPQFIMPTCIAVRESASVGDQAQRRLVKGVDDLDFFIGDEAIDKPNYA 74

  Fly    67 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
            | |:||.|||:.:||.|||......:..||..||:|..|:||.|||...|||.:.:|||||||.|
Zfish    75 T-KWPIRHGIIEDWDFMEKFMEQVIFKYLRAEPEDHNFLMTEPPLNTPENREYLAEIMFETFNVP 138

  Fly   132 AMYVAIQAVLSLYAS-------GRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 188
            .:|:|:||||:|.||       .|| ||||:||||||:|.:|:.|||.:...|..:.:||||:|.
Zfish   139 GLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHAIPVAEGYVIGSCIKHIPIAGRDITY 203

  Fly   189 YLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQ------ 247
            ::.::|.||..........|..:.:||:.||:..|..:|..          .|::..|:      
Zfish   204 FIQQLLREREIGIPPEQSLETAKAVKERYCYICPDIVKEFT----------KYDMDPGKWIKKYK 258

  Fly   248 ----------VITIGNERFRCPESLFQPSFLGMEAC-GIHETTYNSIMKCDVDIRKDLYANTVLS 301
                      .|.:|.|||..||..|.|.|...:.. .|.:.....|..|.:|:|:.||.|.|||
Zfish   259 GINAISKNEFQIDVGYERFLGPEIFFHPEFANPDFMQPISDVVDEVIQNCPIDVRRPLYKNIVLS 323

  Fly   302 GGTTMYPGIADRMQKEIT----------------ALAPSTMKIKIVAPPERKYSVWIGGSILASL 350
            ||:||:.....|:|:::.                .:.|..|::::::...::|:||.|||:|||.
Zfish   324 GGSTMFRDFGRRLQRDLKRVVDARLRLSEELSGGRIKPKPMEVQVISHHMQRYAVWFGGSMLAST 388

  Fly   351 STFQQMWISKQEYDESGPSIV-HRKCF 376
            ..|.|:..:|::|:|.||.|. |...|
Zfish   389 PEFFQVCHTKKDYEEYGPRICRHNPVF 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Act42ANP_523625.1 PTZ00281 1..376 CDD:173506 144/415 (35%)
actr3bXP_005162538.1 COG5277 1..411 CDD:227602 143/411 (35%)
PTZ00280 3..416 CDD:240343 145/417 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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