DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Src42A and RKF1

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:NP_174268.7 Gene:RKF1 / 839853 AraportID:AT1G29750 Length:1021 Species:Arabidopsis thaliana


Alignment Length:993 Identity:205/993 - (20%)
Similarity:349/993 - (35%) Gaps:243/993 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   750 TKEQKTEKENCSRDPI------KPSQEQQL-AVCGKLPLHRSNTSDISSSYYRRNFKIYDKLVYG 807
            :|..|.:.|||..:.:      .|:.:|:: ..|       |.|:|......:..||  |..:.|
plant    59 SKFWKFDAENCKIEMVGLTETPPPTAKQEIECEC-------SPTNDTDCHVVKFAFK--DHNLPG 114

  Fly   808 TIYDIIQ----RKNDIYQKY----------DKYMTYGTIYEILHRKTSQSSDPWQRKSLSSI-LE 857
            |:..|::    |:.|:...|          ...:|:  |..:::|.:.:....:...||:.: ||
plant   115 TLPQIVKLPYLREIDLAYNYINGTLPREWASSNLTF--ISLLVNRLSGEIPKEFGNSSLTYLDLE 177

  Fly   858 GGRSSGDIIYDIGQRRERDKRTLGS--------SSSATVSTINPHKY------GTIYDILQGVK- 907
            ....||.|..::|......|..|.|        :|.|.:..:...:.      |||...:|..| 
plant   178 SNAFSGTIPQELGNLVHLKKLLLSSNKLTGTLPASLARLQNMTDFRINDLQLSGTIPSYIQNWKQ 242

  Fly   908 ------IDAGHVKNKPDQKSKPTKPPLAKPTRFVVSQVVEPVQIPPTDQSGKSVQEQGAPKSNKP 966
                  |.:|                |..|...|:|.:...|.:..:|..| .||    |..:..
plant   243 LERLEMIASG----------------LTGPIPSVISVLSNLVNLRISDIRG-PVQ----PFPSLK 286

  Fly   967 NKMRRLSNILSYSRNSGE--------DQQETTGKEETK-----PKRTQAK--RRIGVTNLLLPLD 1016
            |.......||.....||:        .:.||......|     |...||:  |.|.:...:|..|
plant   287 NVTGLTKIILKNCNISGQIPTYLSHLKELETLDLSFNKLVGGIPSFAQAENLRFIILAGNMLEGD 351

  Fly  1017 S-EELYTRIIAQQRGLDKEHSQEPEEKCASEEQMCTRNALTKSSSLDAISLSVAISPASSPSPPR 1080
            : :||....|......:....|.||.:..........|....:|:..:......|.....|    
plant   352 APDELLRDGITVDLSYNNLKWQSPESRACRPNMNLNLNLFQSTSTKKSSKFLPCIKDFKCP---- 412

  Fly  1081 PRRSLKQHRCLQQH--------QQTPLAKKHSLDNCLQVVSSTTSRQPLRRW-----------SN 1126
                 :...||..:        ::....:.:..|..::..::....:|...|           :|
plant   413 -----RYSSCLHVNCGGSDMYVKEKKTKELYEGDGNVEGGAAKYFLKPDANWGFSSTGDFMDDNN 472

  Fly  1127 QTPLKCTCH-PATEELPLTAIEKSRSLPAACSASCSHTCAHLSVIDQSPATTKCFGKTSLTTAKK 1190
            ....:.|.. ||:.:..|  .:.:|..|.  |.:..|.|                       .:.
plant   473 FQNTRFTMFVPASNQSDL--YKSARIAPV--SLTYFHAC-----------------------LEN 510

  Fly  1191 GKSRRLSEFTRGEFLNEKSW--YFRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRDG 1253
            |......:|....|.|::::  ..|::..|..::||:..:     |.|.|.........:.....
plant   511 GNYTINLDFAEIRFTNDENYNRLGRRLFDIYIQEKLVAKD-----FNIMDEAKGAQTPIIKPLTA 570

  Fly  1254 DTVKHYRIRQLDEGGFFIARRTTFRTLQELVEHYSKDSDGLCVNLCKPCVQIEKPVTEGLS---- 1314
            ....|:...:|...|....|..|......::...|..||.      |||   |:|.| |:|    
plant   571 YVTNHFLTIRLSWAGKGTTRIPTRGVYGPIISAISIVSDS------KPC---ERPKT-GMSPGAY 625

  Fly  1315 ----------------------------HRTRDQWEIDRTS-------LKF-------VRKLGSG 1337
                                        .:.:|.:|.:..|       :||       ..|:|.|
plant   626 IAIGIGAPCLIIFILGFLWICGCLPRCGRQRKDPYEEELPSGTFTLRQIKFATDDFNPTNKIGEG 690

  Fly  1338 QFGDVWEGLWNNTTPVAIKTLKS-GTMDPKDFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITE 1401
            .||.|::|:..:...||:|.|.| .....::||.|...:..|:|..|::|:..|.....:.:..|
plant   691 GFGAVFKGVLADGRVVAVKQLSSKSRQGNREFLNEIGAISCLQHPNLVKLHGFCVERAQLLLAYE 755

  Fly  1402 LMKHGSLLEYLQAIAGKGRSLKMQTLIDMAAQIAAGMAYLESQN---YIHRDLAARNVLVGDGNI 1463
            .|::.||...|.:...|...:...|...:...||.|:|:|..::   ::|||:.|.|:|:.....
plant   756 YMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNILLDKDLT 820

  Fly  1464 VKIADFGLARLIKEDEYEARVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYP 1528
            .||:|||||||.:|::..........|.:.|||.|.:...:.|:||:|||:|:.|:|.       
plant   821 PKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVA------- 878

  Fly  1529 GMTNAEVLTQ-------------VEHGYRM--------PQPPNCEPR-LYEIMLECWHKDPMRRP 1571
            |:||:..:..             ||.|:.|        |:....|.. :.::.|.|....|..||
plant   879 GITNSNFMGAGDSVCLLEFANECVESGHLMQVVDERLRPEVDRKEAEAVIKVALVCSSASPTDRP 943

  Fly  1572 TFETLQWKLEDFYTSDQS 1589
            ....:...||..|...:|
plant   944 LMSEVVAMLEGLYPVPES 961

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 15/92 (16%)
PTKc_Frk_like 1319..1587 CDD:270653 84/307 (27%)
Pkinase_Tyr 1328..1580 CDD:285015 78/284 (27%)
RKF1NP_174268.7 LRR 112..395 CDD:227223 61/305 (20%)
leucine-rich repeat 125..147 CDD:275380 3/21 (14%)
leucine-rich repeat 148..170 CDD:275380 3/23 (13%)
leucine-rich repeat 171..194 CDD:275380 7/22 (32%)
leucine-rich repeat 195..218 CDD:275380 5/22 (23%)
leucine-rich repeat 219..242 CDD:275380 4/22 (18%)
leucine-rich repeat 243..266 CDD:275380 6/38 (16%)
leucine-rich repeat 267..287 CDD:275380 6/24 (25%)
leucine-rich repeat 291..314 CDD:275380 4/22 (18%)
leucine-rich repeat 315..337 CDD:275380 6/21 (29%)
leucine-rich repeat 338..356 CDD:275380 4/17 (24%)
Malectin 417..604 CDD:288557 31/218 (14%)
STYKc 686..952 CDD:214568 76/272 (28%)
STKc_IRAK 687..955 CDD:270968 77/274 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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