DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Src42A and AT5G47070

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:NP_199518.1 Gene:AT5G47070 / 834753 AraportID:AT5G47070 Length:410 Species:Arabidopsis thaliana


Alignment Length:311 Identity:88/311 - (28%)
Similarity:138/311 - (44%) Gaps:46/311 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1322 EIDRTSLKFVRKL--GSGQFGDVWEG--LWNNTTP-----VAIKTL-KSGTMDPKDFLAEAQIMK 1376
            |:.:.:..|.|||  |.|.||.|::|  |.|..:.     ||||.| :.|....|.:|||.|.:.
plant    78 ELSKATYVFSRKLVIGEGGFGIVYKGKILSNGDSSDPPLVVAIKKLNRQGLQGHKQWLAEVQFLG 142

  Fly  1377 KLRHTKLIQLYAVCT------VEEPIYIITELMKHGSLLEYLQAIAGKGRSLKMQTLIDMAAQIA 1435
            .:.|..:::|...|:      :|.  .::.|.|.:.||.::|  ...:..:|..:..:::....|
plant   143 VVNHPNVVKLIGYCSEDGETGIER--LLVYEYMSNRSLEDHL--FPRRSHTLPWKKRLEIMLGAA 203

  Fly  1436 AGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDE----YEARVGARFPIKWTAPE 1496
            .|:.||.....|:||..:.|||:.|....|::||||||...:.:    ..||||..   .:.|||
plant   204 EGLTYLHDLKVIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTH---GYAAPE 265

  Fly  1497 AANYSKFSIKSDVWSFGILLTELVTYGRI-----------------PYPGMTNAEVLTQVEHGYR 1544
            ........:||||:|||::|.|::|..|.                 .||..:....:. |:...|
plant   266 YVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLDWVKEYPADSQRFSMI-VDPRLR 329

  Fly  1545 MPQPPNCEPRLYEIMLECWHKDPMRRPTFETLQWKLEDFY-TSDQSDYKEA 1594
            ...|......|.::...|..|:...|||.|.:..:|:... .||..||..|
plant   330 NNYPAAGARSLAKLADLCLKKNDKERPTMEIVVERLKKIIEESDSEDYPMA 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233
PTKc_Frk_like 1319..1587 CDD:270653 83/302 (27%)
Pkinase_Tyr 1328..1580 CDD:285015 81/288 (28%)
AT5G47070NP_199518.1 STYKc 91..365 CDD:214568 77/281 (27%)
STKc_IRAK 92..368 CDD:270968 78/283 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.