DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Src42A and SRMS

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:NP_543013.1 Gene:SRMS / 6725 HGNCID:11298 Length:488 Species:Homo sapiens


Alignment Length:470 Identity:203/470 - (43%)
Similarity:272/470 - (57%) Gaps:50/470 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1136 PATEELPLTAIEKSRSLPAACSASCSHTCAHLSVIDQSPATTKCFGKTS------LTTAKKGK-- 1192
            |.|:.:|....|.....|.          ..|::.|   .|.:|.|:.|      |...::|.  
Human    36 PNTDPVPTLPAEPCSPFPQ----------LFLALYD---FTARCGGELSVRRGDRLCALEEGGGY 87

  Fly  1193 --SRRLS-EFTRG------------EFLNEKSWYFRKIKRIEAEKKLLLPENEHGAFLIRDSESR 1242
              :|||| :.:.|            |.|:::.|||..:.|.:|::.||.|.||.||||||.|||.
Human    88 IFARRLSGQPSAGLVPITHVAKASPETLSDQPWYFSGVSRTQAQQLLLSPPNEPGAFLIRPSESS 152

  Fly  1243 HNDYSLSVRDGDTVKHYRIRQLDEGGFFIARRTTFRTLQELVEHYSKDSDGLCVNLCKPCVQIEK 1307
            ...||||||....|.|||:....:|..::.:...|..|:||:.:|..:...:...|.:||:..:.
Human   153 LGGYSLSVRAQAKVCHYRVSMAADGSLYLQKGRLFPGLEELLTYYKANWKLIQNPLLQPCMPQKA 217

  Fly  1308 PVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMDPKDFLAEA 1372
            |        .:|.||...:.....||||.|.||:||||||..:.|||||.:||..|...|...|.
Human   218 P--------RQDVWERPHSEFALGRKLGEGYFGEVWEGLWLGSLPVAIKVIKSANMKLTDLAKEI 274

  Fly  1373 QIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAG--KGRSLKMQTLIDMAAQIA 1435
            |.:|.|||.:||:|:|||:..||:||:||||:.|:    |||..|  :||:|::..|:..|.|:|
Human   275 QTLKGLRHERLIRLHAVCSGGEPVYIVTELMRKGN----LQAFLGTPEGRALRLPPLLGFACQVA 335

  Fly  1436 AGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDEYEARVGARFPIKWTAPEAANY 1500
            .||:|||.|..:|||||||||||.||...|:||||||||:|:|.|.....::.|:||||||||||
Human   336 EGMSYLEEQRVVHRDLAARNVLVDDGLACKVADFGLARLLKDDIYSPSSSSKIPVKWTAPEAANY 400

  Fly  1501 SKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYEIMLECWHK 1565
            ..||.||||||||:||.|:.|||:.||.||||.|.|.|:..|||:|:|..|...:|.:|||||..
Human   401 RVFSQKSDVWSFGVLLHEVFTYGQCPYEGMTNHETLQQIMRGYRLPRPAACPAEVYVLMLECWRS 465

  Fly  1566 DPMRRPTFETLQWKL 1580
            .|..||:|.||:.||
Human   466 SPEERPSFATLREKL 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 36/90 (40%)
PTKc_Frk_like 1319..1587 CDD:270653 144/264 (55%)
Pkinase_Tyr 1328..1580 CDD:285015 139/253 (55%)
SRMSNP_543013.1 SH3_Srms 55..109 CDD:212780 13/56 (23%)
SH2 119..197 CDD:301589 34/77 (44%)
PTKc_Srm_Brk 223..483 CDD:133248 143/262 (55%)
STYKc 232..480 CDD:214568 139/251 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.920

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