DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Src42A and Matk

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:XP_038935769.1 Gene:Matk / 60450 RGDID:69058 Length:496 Species:Rattus norvegicus


Alignment Length:510 Identity:170/510 - (33%)
Similarity:241/510 - (47%) Gaps:93/510 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly  1120 PLRRWSNQTPLKCTCHPATEELPLTAIEKSRSLPA--------------ACSASCSHTCAHLSVI 1170
            |.:||:          |.|:  .:|..|.||..|.              ||.....:...|.|  
  Rat     2 PTQRWA----------PGTQ--CMTKCENSRPKPGELAFRKGDMVTILEACEDKSWYRAKHHS-- 52

  Fly  1171 DQSPATTKCFGKTSLTTAKKGKSRR-LSEFTRGEFLNEKSWYFRKIKRIEAEKKLLLPENEHGAF 1234
                     .|:..|..|...:.|. ||...:   |:...|:..||...||.::|..||:  |.|
  Rat    53 ---------SGQEGLLAAAALRQREALSTDPK---LSLMPWFHGKISGQEAIQQLQPPED--GLF 103

  Fly  1235 LIRDSESRHNDYSLSVRDGDTVKHYRIRQLDEGGFFIARRTTFRTLQELVEHYSKDSDGLCVNLC 1299
            |:|:|.....||.|.|..|..|.|||:...| |...|.....|..|.::||||::|...:|..|.
  Rat   104 LVRESARHPGDYVLCVSFGRDVIHYRVLHRD-GHLTIDEAVCFCNLMDMVEHYTRDKGAICTKLV 167

  Fly  1300 KP-CVQIEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTM 1363
            || ..|..|...|.|:   :..|.:|...|....::|.|:||.|.:|.:.. ..||:|.:|. .:
  Rat   168 KPKRKQGAKSAEEELA---KAGWLLDLQHLTLGAQIGEGEFGAVLQGEYLG-QKVAVKNIKC-DV 227

  Fly  1364 DPKDFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAGKGRSL-KMQTL 1427
            ..:.||.|..:|.||:|..|::|..| .:...:||:.|.:..|:|:.:|:.   :||:| ....|
  Rat   228 TAQAFLDETAVMTKLQHRNLVRLLGV-ILHHGLYIVMEHVSKGNLVNFLRT---RGRALVSTSQL 288

  Fly  1428 IDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDEYEARVG---ARFP 1489
            :..|..:|.||.||||:..:||||||||:||.:..:.|::|||||:.      |.|.|   :|.|
  Rat   289 LQFALHVAEGMEYLESKKLVHRDLAARNILVSEDLVAKVSDFGLAKA------ELRKGLDSSRLP 347

  Fly  1490 IKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNA--------------------- 1533
            :|||||||....:||.||||||||:||.|:.:|||.|||.|.::                     
  Rat   348 VKWTAPEALKNGRFSSKSDVWSFGVLLWEVFSYGRAPYPKMVSSTPGRAACASRVTDCPHPCYPL 412

  Fly  1534 --------EVLTQVEHGYRMPQPPNCEPRLYEIMLECWHKDPMRRPTFETLQWKL 1580
                    ||...||.||||..|.:|...::.:|..||..:|.|||.|..:..||
  Rat   413 PPYLQSLKEVSEAVEKGYRMEPPDSCPGPVHTLMGSCWEAEPSRRPPFRKIVEKL 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 34/90 (38%)
PTKc_Frk_like 1319..1587 CDD:270653 109/295 (37%)
Pkinase_Tyr 1328..1580 CDD:285015 105/284 (37%)
MatkXP_038935769.1 SH3 9..67 CDD:418401 13/70 (19%)
SH2_csk_like 77..174 CDD:198190 36/99 (36%)
PKc_like 187..470 CDD:419665 109/293 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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