DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src42A and abl2

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:XP_005166946.1 Gene:abl2 / 570636 ZFINID:ZDB-GENE-020809-2 Length:1182 Species:Danio rerio


Alignment Length:435 Identity:189/435 - (43%)
Similarity:261/435 - (60%) Gaps:31/435 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly  1181 GKTSLTTAKKGKSRRLSEFTRGEF----------------------LNEKSWYFRKIKRIEAEKK 1223
            |..:|:..|..|.|.|.....||:                      |.:.|||...:.|..||  
Zfish   127 GDNTLSITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEKHSWYHGPVSRSAAE-- 189

  Fly  1224 LLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIRQLDEGGFFIARRTTFRTLQELVEHYS 1288
            .||....:|:||:|:|||.....|:|:|....|.||||....:|..::...:.|.||.|||.|:|
Zfish   190 YLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTASDGKVYVTAESRFSTLAELVHHHS 254

  Fly  1289 KDSDGLCVNLCKPCVQIEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWN--NTT 1351
            ..:|||...|..|..:..||...|:| ...|:||::||.:....|||.||:|:|:.|:|.  |.|
Zfish   255 TVADGLVTTLHYPAPKCNKPTVYGVS-PIHDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYNLT 318

  Fly  1352 PVAIKTLKSGTMDPKDFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIA 1416
             ||:||||..||:.::||.||.:||:::|..|:||..|||:|.|.||:||.|.||:||:||:.. 
Zfish   319 -VAVKTLKEDTMEVEEFLKEASVMKEVKHPNLVQLLGVCTLEPPFYIVTEYMPHGNLLDYLREC- 381

  Fly  1417 GKGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDEYE 1481
             :...:....|:.||.||::.|.|||.:|:|||||||||.|||:.::||:|||||:||:..|.|.
Zfish   382 -ERDQVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYT 445

  Fly  1482 ARVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMP 1546
            |..||:|||||||||:..|:.||||||||:||:||.|:.|||..||||:..::|...:|.||||.
Zfish   446 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRME 510

  Fly  1547 QPPNCEPRLYEIMLECWHKDPMRRPTFETLQWKLED-FYTSDQSD 1590
            ||..|.|::||:|..||...|:.||:|..:....|. |:.|..|:
Zfish   511 QPEGCPPKVYELMRACWQWSPLDRPSFAEIHQAFETMFHDSSISE 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 35/90 (39%)
PTKc_Frk_like 1319..1587 CDD:270653 137/270 (51%)
Pkinase_Tyr 1328..1580 CDD:285015 130/253 (51%)
abl2XP_005166946.1 SH3_Abl 116..169 CDD:212784 8/41 (20%)
SH2_ABL 174..267 CDD:198189 36/94 (38%)
PTKc_Abl 286..548 CDD:270645 135/264 (51%)
Pkinase_Tyr 293..544 CDD:285015 130/253 (51%)
FABD 1057..1182 CDD:197885
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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