DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src42A and grapb

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:NP_001025251.2 Gene:grapb / 555184 ZFINID:ZDB-GENE-050913-4 Length:214 Species:Danio rerio


Alignment Length:162 Identity:52/162 - (32%)
Similarity:77/162 - (47%) Gaps:38/162 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly  1204 FLNEK--SWYFRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIRQLDE 1266
            ::|.:  :|:...|.|..||.:  |...|.||||||:|||...::|:||..||.|:|:::.:...
Zfish    52 YINVRPHTWFVGGISRQAAENR--LRPLECGAFLIRESESTPGEFSVSVSYGDHVQHFKVLKDGL 114

  Fly  1267 GGFFIARRTTFRTLQELVEHYSKDSDGLCVNLCKP-CVQIEKPVTEGLSHRTRDQWEI-DRTS-- 1327
            |.:||... .|.:|.:||:.|..:|      :.|. .|.:.:|  ||...|.|....| |.||  
Zfish   115 GQYFIWDE-VFSSLNQLVDFYRINS------IAKERTVFLREP--EGSLARPRHAHAIFDFTSNH 170

  Fly  1328 ---LKFVRKLGSGQFGDV-----------WEG 1345
               |:|:|       |||           |.|
Zfish   171 VTHLRFLR-------GDVIDLLDCSDAQCWRG 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 32/90 (36%)
PTKc_Frk_like 1319..1587 CDD:270653 12/44 (27%)
Pkinase_Tyr 1328..1580 CDD:285015 8/29 (28%)
grapbNP_001025251.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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