DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Src42A and grap2a

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:NP_001017756.1 Gene:grap2a / 550452 ZFINID:ZDB-GENE-050417-275 Length:284 Species:Danio rerio


Alignment Length:83 Identity:30/83 - (36%)
Similarity:46/83 - (55%) Gaps:3/83 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly  1209 SWYFRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIRQLDEGGFFIAR 1273
            ||:.....|..||:.|:  ..|.||||||.|:|...|:|:|||....|:|:::.: |:.|.:...
Zfish    57 SWFKESASRGSAEETLM--SREVGAFLIRGSQSSPGDFSISVRHDYDVQHFKVMK-DKSGHYYLW 118

  Fly  1274 RTTFRTLQELVEHYSKDS 1291
            ...|.:|.:||:.|...|
Zfish   119 TEKFTSLNKLVDFYKTTS 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 29/82 (35%)
PTKc_Frk_like 1319..1587 CDD:270653
Pkinase_Tyr 1328..1580 CDD:285015
grap2aNP_001017756.1 SH3_GRAP2_N 2..53 CDD:212880
SH2_Grb2_like 54..147 CDD:199828 30/83 (36%)
SH3_GRAP2_C 231..283 CDD:212883
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.