DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src42A and Abl

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:NP_001261962.1 Gene:Abl / 45821 FlyBaseID:FBgn0000017 Length:1723 Species:Drosophila melanogaster


Alignment Length:620 Identity:234/620 - (37%)
Similarity:318/620 - (51%) Gaps:107/620 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1030 GLDKEHSQEPEEKCASEE--QMCTRNALTKSSSLDA------ISLSVAISPASSPSPPRPRRS-- 1084
            ||.:......:.:|....  .:.|.:..||.||...      ::|...:.  |.|.|..|..|  
  Fly    85 GLSQRSGGHKDARCNPTVGLNIFTEHNGTKHSSFRGHPGKYHMNLEALLQ--SRPLPHIPAGSTA 147

  Fly  1085 ---LKQHRCLQQHQQ---------TPLAKKHSLDNCLQVVSSTTSRQPLRRWSNQTPLKCTCHPA 1137
               |.....||||||         :.|...||        |:|:..:...||:::..|..   |.
  Fly   148 ASLLADAAELQQHQQDSGGLGLQGSSLGGGHS--------STTSVFESAHRWTSKENLLA---PG 201

  Fly  1138 TEELPLTAIEKSRSLPAACSASCSHTCAHLSVIDQSPATTKCF----GKTSLTTAKKGKSRRLSE 1198
            .||                              |........:    |..:..:.|||:..|:..
  Fly   202 PEE------------------------------DDPQLFVALYDFQAGGENQLSLKKGEQVRILS 236

  Fly  1199 FTR-GEF-----------------------LNEKSWYFRKIKRIEAEKKLLLPENEHGAFLIRDS 1239
            :.: ||:                       |.:.|||...|.|..||  .||....:|:||:|:|
  Fly   237 YNKSGEWCEAHSDSGNVGWVPSNYVTPLNSLEKHSWYHGPISRNAAE--YLLSSGINGSFLVRES 299

  Fly  1240 ESRHNDYSLSVRDGDTVKHYRIRQLDEGGFFIARRTTFRTLQELVEHYS--KDSDGLCVNLCKPC 1302
            ||.....|:|:|....|.||||.:..:|..|:.:...|.||.|||.|:|  .:..||...|..|.
  Fly   300 ESSPGQRSISLRYEGRVYHYRISEDPDGKVFVTQEAKFNTLAELVHHHSVPHEGHGLITPLLYPA 364

  Fly  1303 VQIEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLW---NNTTPVAIKTLKSGTMD 1364
            .:..||....||... |:|||.||.:....|||.||:|:|:|.:|   .||  ||:||||..||.
  Fly   365 PKQNKPTVFPLSPEP-DEWEICRTDIMMKHKLGGGQYGEVYEAVWKRYGNT--VAVKTLKEDTMA 426

  Fly  1365 PKDFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAGKGRSLKMQTLID 1429
            .||||.||.|||:::|..|:||..|||.|.|.|||||.|.||:||::|:: ||: .:|....|:.
  Fly   427 LKDFLEEAAIMKEMKHPNLVQLIGVCTREPPFYIITEFMSHGNLLDFLRS-AGR-ETLDAVALLY 489

  Fly  1430 MAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDEYEARVGARFPIKWTA 1494
            ||.|||:||:||||:|||||||||||.||||..:||:||||||||:::|.|.|..||:|||||||
  Fly   490 MATQIASGMSYLESRNYIHRDLAARNCLVGDNKLVKVADFGLARLMRDDTYTAHAGAKFPIKWTA 554

  Fly  1495 PEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYEIM 1559
            ||...|:|||.|||||:||:||.|:.|||..|||.:...:|..:::.||||.:||.|.|.:|::|
  Fly   555 PEGLAYNKFSTKSDVWAFGVLLWEIATYGMSPYPAIDLTDVYHKLDKGYRMERPPGCPPEVYDLM 619

  Fly  1560 LECWHKDPMRRPTFETLQWKLEDFYTSDQSDYKEA 1594
            .:||..|...||||:::...||..:  .:|...||
  Fly   620 RQCWQWDATDRPTFKSIHHALEHMF--QESSITEA 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 36/92 (39%)
PTKc_Frk_like 1319..1587 CDD:270653 148/270 (55%)
Pkinase_Tyr 1328..1580 CDD:285015 140/254 (55%)
AblNP_001261962.1 SH3_Abl 209..263 CDD:212784 7/53 (13%)
SH2_ABL 268..363 CDD:198189 37/96 (39%)
PTKc_Abl 382..644 CDD:270645 147/265 (55%)
Pkinase_Tyr 389..640 CDD:285015 140/254 (55%)
FABD 1584..1723 CDD:197885
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468396
Domainoid 1 1.000 165 1.000 Domainoid score I1208
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D17578at33392
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24418
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.950

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