DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src42A and lyn

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:NP_001004543.1 Gene:lyn / 447804 ZFINID:ZDB-GENE-040912-7 Length:510 Species:Danio rerio


Alignment Length:529 Identity:238/529 - (44%)
Similarity:331/529 - (62%) Gaps:54/529 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1087 QHRCLQQHQQTPLAKKHSLDNCLQVVSSTTSRQPLRRWSNQTPLKCTCHPATEE----LPLTAIE 1147
            |:.|:.:    |:.|:|.:......|...||.:|               |.|.:    ||....:
Zfish    12 QNGCVLE----PVNKEHPVRTDQTYVRDPTSYKP---------------PITSQNAGLLPGQVFQ 57

  Fly  1148 KSRSLPAACSASCSHTCAH-----------LSVIDQSPATTKCFGKTSLTTAKKG--KSRRLSEF 1199
            |.........|...:...|           |.:|::.....|.   .||||.|:|  .|..::| 
Zfish    58 KMEEKEKIVVALYPYEAIHADDLGFKKGEKLKIIEEHGEWWKA---RSLTTRKEGFIPSNYVAE- 118

  Fly  1200 TRGEFLNEKSWYFRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRD-----GDTVKHY 1259
              .:.:..:.|:::.|.|.:||::||.|.|:.|::|||:||:....||||:||     .|.||||
Zfish   119 --ADTMETEEWFYKDITRKDAERQLLAPANKPGSYLIRESETSKGSYSLSIRDVDAQGQDVVKHY 181

  Fly  1260 RIRQLDEGGFFIARRTTFRTLQELVEHYSKDSDGLCVNLCKPCVQIEKPVTEGLSHRTRDQWEID 1324
            :||.||.||::|:.:.||..:..:::||.|.|||||..|.|.|   |||..:  ....:|.|||.
Zfish   182 KIRSLDNGGYYISPKITFSDISSMIKHYHKQSDGLCRKLDKAC---EKPKAQ--KPWDKDAWEIS 241

  Fly  1325 RTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMDPKDFLAEAQIMKKLRHTKLIQLYAV 1389
            :.|:|.|:|||:||||:||...:||:|.||:||||.|||..:.||.||.:||.|:|.:|::||||
Zfish   242 KDSIKMVKKLGAGQFGEVWMAFYNNSTKVAVKTLKPGTMSVEAFLEEANLMKTLQHDRLVRLYAV 306

  Fly  1390 CTVEEPIYIITELMKHGSLLEYLQAIAGKGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAAR 1454
            .|..||||||||.|.:||||::|::.||.  .:::..|||.:||||.||||:|.:|||||||.|.
Zfish   307 VTKTEPIYIITEYMANGSLLDFLKSQAGS--KIQLPKLIDFSAQIAEGMAYIEKKNYIHRDLRAA 369

  Fly  1455 NVLVGDGNIVKIADFGLARLIKEDEYEARVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTEL 1519
            ||||.:..:.|||||||||:|::|:|.||.||:||||||||||.||..|:||||:||||:||.|:
Zfish   370 NVLVSEMLLCKIADFGLARVIEDDQYTAREGAKFPIKWTAPEAINYGSFTIKSDMWSFGVLLYEI 434

  Fly  1520 VTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYEIMLECWHKDPMRRPTFETLQWKLEDFY 1584
            :|||:||||||:|:||::.|:.|||||:|.||...|||||..||...|..||||:.:|..|:|||
Zfish   435 ITYGKIPYPGMSNSEVMSSVQRGYRMPRPENCPVELYEIMTTCWKNKPEDRPTFDYIQSVLDDFY 499

  Fly  1585 TSDQSDYKE 1593
            |:.:..|::
Zfish   500 TATEGQYQQ 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 44/95 (46%)
PTKc_Frk_like 1319..1587 CDD:270653 161/267 (60%)
Pkinase_Tyr 1328..1580 CDD:285015 151/251 (60%)
lynNP_001004543.1 SH3_Lyn 65..120 CDD:212937 13/60 (22%)
SH2_Src_Lyn 123..223 CDD:198227 44/99 (44%)
PTKc_Lyn 237..508 CDD:270657 161/272 (59%)
Pkinase_Tyr 245..495 CDD:285015 151/251 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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