DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src42A and Fak

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:NP_001137718.1 Gene:Fak / 37233 FlyBaseID:FBgn0020440 Length:1500 Species:Drosophila melanogaster


Alignment Length:552 Identity:152/552 - (27%)
Similarity:238/552 - (43%) Gaps:144/552 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1092 QQHQQTPLAKKHSLDNCLQVVSSTTSRQPLRRWSNQTP------LKCTCHPATEELPLTAIEKSR 1150
            |.|.|..|.......:.:.:.:.|..::.|.:....|.      ..|.|.....::.::|.....
  Fly   292 QTHPQASLKNVAQFKDVVSIKTCTLPKEKLSKSGENTTEPELQNFNCNCQKIKTQIKISASNNVE 356

  Fly  1151 SLPAACSA-SCSHTCAHLSVIDQSPATTKCFGKTSLTTAKKGKSRRLS---EFTRGEFLNEKSWY 1211
            .|...|:. :.:.:.|.|  ||                   |..|.||   |||        .|:
  Fly   357 DLVITCNGINTAESIADL--ID-------------------GYCRLLSKDLEFT--------IWH 392

  Fly  1212 FRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIRQLDEGGFFIARRTT 1276
                                     |::.:.:.|.:.::.:..|                     
  Fly   393 -------------------------RETNASNEDSAKALPNDAT--------------------- 411

  Fly  1277 FRTLQELVEHYSKDSDGLCVNLCKPCV---QIEKPVTEG---LSHRTRDQWEIDRTSLKFVRKLG 1335
                  |..:.|..|.|      ||.:   ..|..:.||   .|..|...:|:||..:....|:|
  Fly   412 ------LGSNKSTSSQG------KPMLTDDYAEIGLLEGEGDYSTPTVRNYELDRALITPSAKIG 464

  Fly  1336 SGQFGDVWEGLWNNTTP------------------------------VAIKTLKSGTMDP---KD 1367
            .||||||:.|.:  |.|                              |||||.|:.. ||   ::
  Fly   465 VGQFGDVYVGTY--TLPKLGKGKNLAGNGKNSNSDQRNADSRPDVIQVAIKTCKAND-DPEKTEN 526

  Fly  1368 FLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAGKGRSLKMQTLIDMAA 1432
            |||||.||:|..|..:|:|..:|:| .||:|:.||.|.|.|..||:.   ....|...||:....
  Fly   527 FLAEAYIMQKFDHPHIIRLIGICSV-MPIWIVMELAKLGELRAYLKT---NSERLSHGTLLKYCY 587

  Fly  1433 QIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDE-YEARVGARFPIKWTAPE 1496
            |::..::||||:.::|||:|||||||.....||:|||||:|.:.:.. |.:......||||.:||
  Fly   588 QLSTALSYLESKKFVHRDIAARNVLVSSPTCVKLADFGLSRWVSDQSYYHSTPTVALPIKWMSPE 652

  Fly  1497 AANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYEIMLE 1561
            :.|:.:|:..||||.||:.:.|::..|..|:.|:.|::|:.::|:|.|:|.||||.||||.:|.:
  Fly   653 SINFRRFTTASDVWMFGVCIWEILMLGVKPFQGVKNSDVILKLENGERLPLPPNCPPRLYSLMSQ 717

  Fly  1562 CWHKDPMRRPTFETLQWKLEDFYTSDQSDYKE 1593
            ||..:|::||.|:.::..|.:....|..:..|
  Fly   718 CWAYEPLKRPNFKRIKETLHEILIEDSINSSE 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 8/90 (9%)
PTKc_Frk_like 1319..1587 CDD:270653 112/301 (37%)
Pkinase_Tyr 1328..1580 CDD:285015 108/285 (38%)
FakNP_001137718.1 B41 24..267 CDD:214604
FERM_B-lobe 152..257 CDD:271216
FERM_C_FAK1 263..394 CDD:270011 24/155 (15%)
PTKc_FAK 450..744 CDD:133187 112/300 (37%)
Pkinase_Tyr 462..736 CDD:285015 108/280 (39%)
Focal_AT 1249..1376 CDD:281606
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468394
Domainoid 1 1.000 165 1.000 Domainoid score I1208
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

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