DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src42A and Grap

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:NP_001020920.1 Gene:Grap / 363616 RGDID:1306884 Length:217 Species:Rattus norvegicus


Alignment Length:100 Identity:36/100 - (36%)
Similarity:55/100 - (55%) Gaps:4/100 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly  1190 KGKSRRLSEFTRGEFLNEK--SWYFRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRD 1252
            |.:.|....|....::..|  .||..:|.|..|| :.|:..|..||||||:|||...::|:||..
  Rat    38 KAELRGAEGFVPKNYIRVKPHPWYSGRISRQLAE-ETLMKRNHLGAFLIRESESSPGEFSVSVNY 101

  Fly  1253 GDTVKHYRIRQLDEGGFFIARRTTFRTLQELVEHY 1287
            ||.|:|:::.:...|.:|:... .|.:|.|||:.|
  Rat   102 GDQVQHFKVLREASGKYFLWEE-KFNSLNELVDFY 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 31/77 (40%)
PTKc_Frk_like 1319..1587 CDD:270653
Pkinase_Tyr 1328..1580 CDD:285015
GrapNP_001020920.1 SH3_GRAP_N 2..55 CDD:212881 3/16 (19%)
SH2_Grb2_like 56..150 CDD:199828 32/81 (40%)
SH3 162..214 CDD:418401
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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