DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Src42A and Abl2

DIOPT Version :10

Sequence 1:NP_001400996.1 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1606 Species:Drosophila melanogaster
Sequence 2:NP_001382059.1 Gene:Abl2 / 304883 RGDID:1590898 Length:1182 Species:Rattus norvegicus


Alignment Length:443 Identity:188/443 - (42%)
Similarity:261/443 - (58%) Gaps:38/443 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly  1181 GKTSLTTAKKGKSRRLSEFTRGEF----------------------LNEKSWYFRKIKRIEAEKK 1223
            |..:|:..|..|.|.|.....||:                      |.:.|||...:.|..||  
  Rat   122 GDNTLSITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEKHSWYHGPVSRSAAE-- 184

  Fly  1224 LLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIRQLDEGGFFIARRTTFRTLQELVEHYS 1288
            .||....:|:||:|:|||.....|:|:|....|.||||....:...::...:.|.||.|||.|:|
  Rat   185 YLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTTDSKVYVTAESRFSTLAELVHHHS 249

  Fly  1289 KDSDGLCVNLCKPCVQTNSFSGVFEIEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWE 1353
            ..:|||...|..|..:.|         ||...|:| ...|:||::||.:....|||.||:|:|:.
  Rat   250 TVADGLVTTLHYPAPKCN---------KPTVYGVS-PIHDKWEMERTDITMKHKLGGGQYGEVYV 304

  Fly  1354 GLWNN-TTPVAIKTLKSGTMDPKDFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSL 1417
            |:|.. :..||:||||..||:.::||.||.:||:::|..|:||..|||:|.|.||:||.|.:|:|
  Rat   305 GVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNL 369

  Fly  1418 LEYLQAIAGKGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLAR 1482
            |:||:..:.:  .:....|:.||.||::.|.|||.:|:|||||||||.|||:.::||:|||||:|
  Rat   370 LDYLRECSRE--EVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSR 432

  Fly  1483 LIKEDEYEARVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQ 1547
            |:..|.|.|..||:|||||||||:..|:.||||||||:||:||.|:.|||..||||:..::|...
  Rat   433 LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDL 497

  Fly  1548 VEHGYRMPQPPNCEPRLYEIMLECWHKDPMRRPTF-ETLQWKLEDFYTSDQSD 1599
            :|.||||.||..|.|::||:|..||...|..||:| ||.|.....|:.|..|:
  Rat   498 LEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETMFHDSSISE 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_001400996.1 SH2_Src_Src42 1210..1301 CDD:198233 34/90 (38%)
PTKc_Frk_like 1328..1596 CDD:270653 136/269 (51%)
Abl2NP_001382059.1 SH3_Abl 111..164 CDD:212784 8/41 (20%)
SH2_ABL 169..262 CDD:198189 35/94 (37%)
PTKc_Abl 281..543 CDD:270645 134/263 (51%)
FABD 1063..1182 CDD:197885
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.