DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src42A and Abl2

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:XP_038946666.1 Gene:Abl2 / 304883 RGDID:1590898 Length:1188 Species:Rattus norvegicus


Alignment Length:434 Identity:187/434 - (43%)
Similarity:260/434 - (59%) Gaps:29/434 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly  1181 GKTSLTTAKKGKSRRLSEFTRGEF----------------------LNEKSWYFRKIKRIEAEKK 1223
            |..:|:..|..|.|.|.....||:                      |.:.|||...:.|..||  
  Rat   122 GDNTLSITKGEKLRVLGYNQNGEWSEVRSKNGQGWVPSNYITPVNSLEKHSWYHGPVSRSAAE-- 184

  Fly  1224 LLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIRQLDEGGFFIARRTTFRTLQELVEHYS 1288
            .||....:|:||:|:|||.....|:|:|....|.||||....:...::...:.|.||.|||.|:|
  Rat   185 YLLSSLINGSFLVRESESSPGQLSISLRYEGRVYHYRINTTTDSKVYVTAESRFSTLAELVHHHS 249

  Fly  1289 KDSDGLCVNLCKPCVQIEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNN-TTP 1352
            ..:|||...|..|..:..||...|:| ...|:||::||.:....|||.||:|:|:.|:|.. :..
  Rat   250 TVADGLVTTLHYPAPKCNKPTVYGVS-PIHDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLT 313

  Fly  1353 VAIKTLKSGTMDPKDFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAG 1417
            ||:||||..||:.::||.||.:||:::|..|:||..|||:|.|.||:||.|.:|:||:||:..:.
  Rat   314 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECSR 378

  Fly  1418 KGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDEYEA 1482
            :  .:....|:.||.||::.|.|||.:|:|||||||||.|||:.::||:|||||:||:..|.|.|
  Rat   379 E--EVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTA 441

  Fly  1483 RVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQ 1547
            ..||:|||||||||:..|:.||||||||:||:||.|:.|||..||||:..::|...:|.||||.|
  Rat   442 HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQ 506

  Fly  1548 PPNCEPRLYEIMLECWHKDPMRRPTF-ETLQWKLEDFYTSDQSD 1590
            |..|.|::||:|..||...|..||:| ||.|.....|:.|..|:
  Rat   507 PEGCPPKVYELMRACWKWSPADRPSFAETHQAFETMFHDSSISE 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 34/90 (38%)
PTKc_Frk_like 1319..1587 CDD:270653 136/269 (51%)
Pkinase_Tyr 1328..1580 CDD:285015 130/253 (51%)
Abl2XP_038946666.1 SH3_Abl 111..164 CDD:212784 8/41 (20%)
SH2_ABL 169..262 CDD:198189 35/94 (37%)
PTKc_Abl 281..543 CDD:270645 134/263 (51%)
FABD 1069..1188 CDD:197885
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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