DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src42A and skb5

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:NP_588016.1 Gene:skb5 / 2539237 PomBaseID:SPCC24B10.13 Length:140 Species:Schizosaccharomyces pombe


Alignment Length:106 Identity:27/106 - (25%)
Similarity:38/106 - (35%) Gaps:45/106 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 EFLLDPKYSSTPEASPDVE------------------PSVE---LAEGGAAGEILYEFLCCAKCM 180
            |..:|..:..|.|.|.|.|                  ||..   ||:..|    ||:|    :.:
pombe    38 ERFVDDTFDETIEGSDDSESIDDTEVFYDAEESESTHPSASFNVLADAVA----LYDF----EPL 94

  Fly   181 NEQRTGLTCAGRRLQRYLRTC---SSGSG------NASGRN 212
            ::...|.| .|:||      |   .|..|      :||||:
pombe    95 HDNELGFT-TGQRL------CILSESSDGWLIAYDDASGRS 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233
PTKc_Frk_like 1319..1587 CDD:270653
Pkinase_Tyr 1328..1580 CDD:285015
skb5NP_588016.1 SH3_Nbp2-like 84..138 CDD:212799 16/60 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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