DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Src42A and Y47G6A.5

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:NP_491175.2 Gene:Y47G6A.5 / 189992 WormBaseID:WBGene00021635 Length:618 Species:Caenorhabditis elegans


Alignment Length:630 Identity:193/630 - (30%)
Similarity:291/630 - (46%) Gaps:124/630 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1034 EHSQEPEEKCASEEQMCTRN----ALTKSSSLDAISLSV-AISPASSPSPPRPRRSLKQHRCLQQ 1093
            :||.. |:|...:|:...|.    .|....|..:..|:: .:.|.|:||...|            
 Worm     4 KHSHH-EKKNKKDERNNNREYRSAVLLDDGSFSSQELALRPVMPESTPSVAVP------------ 55

  Fly  1094 HQQTPLAKKHSLDNCLQVVSSTTSRQPL---RRWSNQTPL-------KCTCHP---ATEELPLTA 1145
                  ||...|....|.||||..|.|:   |..||..|.       ..:.||   :|:.:|..|
 Worm    56 ------AKPPPLRPSTQSVSSTDPRPPIPPRRSESNLVPPPIPHHSGNISRHPSATSTKSVPNGA 114

  Fly  1146 ------IEKSRSLPAACSASCSH-----------------TCAHLSV--------IDQSPATTKC 1179
                  :.|:.|...  ||.|||                 |...:||        |:||      
 Worm   115 SFSPRPVSKTHSHHG--SAKCSHSEPEEKMLIVENRFLAQTPKEMSVEEGDVLYLIEQS------ 171

  Fly  1180 FGKTSLTTAKKGKSRRLSEF------TRGEFLNEKSWYFRKIKRIEAEKKLLLPENEHGAFLIRD 1238
             .:.....|  .|||:...|      ...|:  .:.|:...|..|.||::::.|:...|:||||:
 Worm   172 -NREWWYVA--SKSRQFKGFVPKSHVVYAEY--REPWFAGNISSILAEQRVMQPQLPIGSFLIRE 231

  Fly  1239 SESRHNDYSLSVRD--GDTVKHYRI-RQLDEGGFFIARR-----TTFRTLQELVEHYSKDSDGLC 1295
            : |:.:.:.|.||.  .::.:.|.| |:.::.||.|...     ..|.:|.:||.|||.:.....
 Worm   232 N-SKTDTFVLVVRSSHNESPQAYIIYRRPNQEGFEIRDNHRPAVIHFGSLHQLVNHYSCEKVPGE 295

  Fly  1296 VNLCKPCVQIEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLK- 1359
            :.:|....:...|:.|...:....:..::|:.::.|:::|.||||:|:...|.. ..||:|:|| 
 Worm   296 IQICTKLTKAAPPLPEQTEYMAMKKIHVNRSEVRRVKEIGRGQFGEVYLAKWKG-VDVAVKSLKP 359

  Fly  1360 --SGTMDPKDFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAGKGRSL 1422
              |..:....||.||:.:.||.|..:|.|.|||..::|..||||.|.:||||.:||.:.   ::|
 Worm   360 DHSEQLANTQFLEEAKTLTKLSHQNVIHLLAVCDTDKPYLIITEFMTNGSLLAWLQKLT---KTL 421

  Fly  1423 -----------KMQTLI--DMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGN-----IVKIADF 1469
                       :...||  .::||:|:||.||.:...:||||||||||||..:     :||:|||
 Worm   422 PPIPLMSEETGRKNVLIGASISAQVASGMDYLSANKIVHRDLAARNVLVGTVSSNGVPLVKVADF 486

  Fly  1470 GLARL--IKEDEYEARVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTN 1532
            ||||.  :.::.|..:.....|.||.|||..:...|:.|:||||:||||.|:.|.|:.||.|...
 Worm   487 GLARKTDVGDENYVMKTDNMLPWKWMAPECFDEQIFNTKTDVWSYGILLWEIGTLGKTPYRGWDY 551

  Fly  1533 AEVLTQVEHGYRMPQPPNCEPRLYEIMLE-CWHKDPMRRPTFETL 1576
            ...|..:..||.:|:|......:||...: |.|.||.|||||:.|
 Worm   552 EGTLEHLSRGYVLPRPELVPDYVYEDAFKICVHLDPRRRPTFDRL 596

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 29/98 (30%)
PTKc_Frk_like 1319..1587 CDD:270653 110/282 (39%)
Pkinase_Tyr 1328..1580 CDD:285015 109/273 (40%)
Y47G6A.5NP_491175.2 SH3 151..194 CDD:302595 11/51 (22%)
SH2 201..305 CDD:301589 29/104 (28%)
TyrKc 328..600 CDD:197581 109/273 (40%)
PTKc 332..601 CDD:270623 108/269 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.