DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src42A and hir-1

DIOPT Version :10

Sequence 1:NP_001400996.1 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1606 Species:Drosophila melanogaster
Sequence 2:NP_504458.1 Gene:hir-1 / 178936 WormBaseID:WBGene00016059 Length:903 Species:Caenorhabditis elegans


Alignment Length:637 Identity:171/637 - (26%)
Similarity:261/637 - (40%) Gaps:166/637 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1076 PSPPRPRRSLKQHRCLQQHQQTPLAKKHSLDNCL-----QVVSSTTS--RQPLRRWSNQTPLKCT 1133
            ||||.......|..| ...:..|..|..|....|     .|..|..|  |:.|...::...:..|
 Worm   289 PSPPSSALQTIQVEC-DIVKNAPCVKVPSYQPPLCGMVENVAFSVLSRDRENLNDPASNLTVNVT 352

  Fly  1134 CHPATEELPLTAIEKSRSLPAAC------SASCSHTCAHLSVIDQSPATTKCFGKTSLTTAKKGK 1192
            ..|.|         ::..:|...      :||..||....:.:..:  .|...||.|..|.....
 Worm   353 FIPVT---------RNNEMPTLYYIGIFGTASEYHTKEEETFLGVN--ITHVIGKESSCTGFDSS 406

  Fly  1193 SRRLSE-FTRG---EFLNEKSWYFRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRDG 1253
            ...|:| ..|.   :.::.|:.|...|..::..:.|.||:      :..||:|            
 Worm   407 GNCLAENLNRSIVLQGIHPKTLYGLTICAVKDIRNLTLPD------VTLDSKS------------ 453

  Fly  1254 DTVKHYRIRQLDEGGFFIARRTTFRTLQE---LVEHYSKDSDGLCVNLCKPCV------------ 1303
                                   ||...:   ||.|.|.:..|:.:.:....:            
 Worm   454 -----------------------FRAKADRIMLVAHTSNNPVGMIIGIVIGSLVVILVAIVVIWF 495

  Fly  1304 ----QTNSFSGVFEIEKPVTEGLSHRTR-----------DQWEIDRTSLKF--VRKLGSGQFGDV 1351
                ::.:....|::|:   .|.::..|           |.|||:|.:|..  .:|||||.||.|
 Worm   496 YFRKKSENMKFKFQMEQ---VGKNNMNRYIDFPIMAAKNDIWEIERRNLIIHNDKKLGSGAFGAV 557

  Fly  1352 WEG--------------------LWNNTTPVAIKTLK--SGTMDPKDFLAEAQIMKKL-RHTKLI 1393
            :.|                    :......||:|.|.  :..|...:||.|..:||.| .|.:|:
 Worm   558 YLGKLIGKSLAHKDANSPLGINLMRAENCQVAVKMLPEYADEMSKHEFLREIALMKTLGYHERLV 622

  Fly  1394 QLYAVCTVEEPIYIITELMKHGSLL-------EYLQAIAGKGRS---------------LKMQTL 1436
            .:.|..|..||:.::.|...:|.||       :|:..:...|.:               :.::.|
 Worm   623 NMLACVTESEPLCLVVEYCDNGDLLKFLRERCKYMMKLDDLGINYHDPPENENYDTNMIVTLKQL 687

  Fly  1437 IDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKED--EYEARVGARFPI 1499
            :..|.||:.|:.||..:.::|||:|||||||.:|...||.||||.|.|..|  :|::: |.:.|:
 Worm   688 LQFAVQISYGLEYLSQKGFVHRDVAARNVLVHEGTACKIGDFGLCRYIYADQSQYKSK-GGKLPL 751

  Fly  1500 KWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRL 1564
            ||.:|||..:.:||||||:|||||||.|::|.|..|||||...:||..:|.|.|:.:|.||....
 Worm   752 KWMSPEAIRHYEFSIKSDIWSFGILLFEVITLGGSPYPGMPPEDVLPFLEGGGRIEKPDNCPENF 816

  Fly  1565 YEIMLECWHKDPMRRPTFE----TLQWKLEDFYTSDQS--------DYKEAQ 1604
            |::|::||:.||..|..|.    .|..:|||. |.|.|        ||...|
 Worm   817 YDVMMQCWNADPDDRIEFSDVRMQLATQLEDI-TEDYSYLKLDAAKDYYNVQ 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_001400996.1 SH2_Src_Src42 1210..1301 CDD:198233 15/93 (16%)
PTKc_Frk_like 1328..1596 CDD:270653 115/320 (36%)
hir-1NP_504458.1 fn3 85..164 CDD:394996
RGP 227..>281 CDD:385243
PTKc 547..842 CDD:270623 104/295 (35%)
Blue background indicates that the domain is not in the aligned region.

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