DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src42A and src-1

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:NP_001364829.1 Gene:src-1 / 171722 WormBaseID:WBGene00005077 Length:537 Species:Caenorhabditis elegans


Alignment Length:405 Identity:217/405 - (53%)
Similarity:275/405 - (67%) Gaps:17/405 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly  1205 LNEKSWYFRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRD------GDTVKHYRIRQ 1263
            :..:.||..||.|..||:.:|......|.||||:.|:...:::|::||      |.|||||:|::
 Worm   137 IESEEWYAGKIPRNRAERLVLSSHLPKGTFLIREREADTREFALTIRDTDDQRNGGTVKHYKIKR 201

  Fly  1264 LD-EGGFFIARRTTFRTLQELVEHYSKDSDGLCVNLCKPCVQIEKPVTEGLSHRTRDQWEIDRTS 1327
            || :.|:||..|.|||:|||||.:||...||||..|..|..:: .|....|||.|:..|||.|..
 Worm   202 LDHDQGYFITTRRTFRSLQELVRYYSDVPDGLCCQLTFPAPRL-APTRPDLSHDTQQNWEIPRNQ 265

  Fly  1328 LKFVRKLGSGQFGDVWEGLWNNTTPVAIKTLKSGTMDPKDFLAEAQIMKKLRHTKLIQLYAVCTV 1392
            |...||||.|.||:||.|.|.....|||||:|.|||.|:.||.||||||:..|..|::||||||.
 Worm   266 LHLKRKLGDGNFGEVWYGKWRGIVEVAIKTMKPGTMSPEAFLQEAQIMKQCDHPNLVKLYAVCTR 330

  Fly  1393 EEPIYIITELMKHGSLLEYLQAIAGKGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVL 1457
            |||.|||||.|.:||||:||:.   .|.:|.:|.|:|||||||.||.|||.:..:||||||||||
 Worm   331 EEPFYIITEYMINGSLLQYLRT---DGSTLGIQALVDMAAQIANGMMYLEERKLVHRDLAARNVL 392

  Fly  1458 VGDG----NIVKIADFGLAR-LIKEDEYEARVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLT 1517
            |||.    .:||:||||||| |::||.||||.||:|||||||||||....|::||||||:||||.
 Worm   393 VGDKISGVPVVKVADFGLARKLMEEDIYEARTGAKFPIKWTAPEAATCGNFTVKSDVWSYGILLY 457

  Fly  1518 ELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLY-EIMLECWHKDPMRRPTFETLQWKLE 1581
            |::|.|::|||||.|.||:.|||.|||||.|..|..::| |::|:||.|.|.|||||:||....:
 Worm   458 EIMTKGQVPYPGMHNREVVEQVELGYRMPMPRGCPEQIYEEVLLKCWDKTPDRRPTFDTLYHFFD 522

  Fly  1582 DFYTSDQSDYKEAQA 1596
            |::.|.|.:|....|
 Worm   523 DYFVSTQPNYAPPSA 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 45/97 (46%)
PTKc_Frk_like 1319..1587 CDD:270653 162/273 (59%)
Pkinase_Tyr 1328..1580 CDD:285015 157/257 (61%)
src-1NP_001364829.1 SH3_Src_like 79..130 CDD:212779
SH2_Src_family 138..240 CDD:199827 45/101 (45%)
PTKc_Src_like 270..522 CDD:270630 156/254 (61%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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