DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src42A and Lyn

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:NP_001104566.1 Gene:Lyn / 17096 MGIID:96892 Length:512 Species:Mus musculus


Alignment Length:436 Identity:224/436 - (51%)
Similarity:296/436 - (67%) Gaps:41/436 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  1189 KKGKSRRLSEFTRGEFLNEKS------------------------WYFRKIKRIEAEKKLLLPEN 1229
            |||:..::.| ..||:...||                        |:|:.|.|.:||::||.|.|
Mouse    85 KKGEKMKVLE-EHGEWWKAKSLSSKREGFIPSNYVAKVNTLETEEWFFKDITRKDAERQLLAPGN 148

  Fly  1230 EHGAFLIRDSESRHNDYSLSVRD-----GDTVKHYRIRQLDEGGFFIARRTTFRTLQELVEHYSK 1289
            ..||||||:||:....:||||||     ||.:|||:||.||.||::|:.|.||..:.::::||.|
Mouse   149 SAGAFLIRESETLKGSFSLSVRDYDPMHGDVIKHYKIRSLDNGGYYISPRITFPCISDMIKHYQK 213

  Fly  1290 DSDGLCVNLCKPCV--QIEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNNTTP 1352
            .|||||..|.|.|:  :.:||       ..:|.|||.|.|:|.|:|||:||||:||.|.:||:|.
Mouse   214 QSDGLCRRLEKACISPKPQKP-------WDKDAWEIPRESIKLVKKLGAGQFGEVWMGYYNNSTK 271

  Fly  1353 VAIKTLKSGTMDPKDFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAG 1417
            ||:||||.|||..:.||.||.:||.|:|.||::||||.|.|||||||||.|..||||::|:  :.
Mouse   272 VAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLK--SD 334

  Fly  1418 KGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDEYEA 1482
            :|..:.:..|||.:||||.||||:|.:|||||||.|.||||.:..:.|||||||||:|:::||.|
Mouse   335 EGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 399

  Fly  1483 RVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQ 1547
            |.||:||||||||||.|:..|:||||||||||||.|:||||:|||||.|||:|::.:..|||||:
Mouse   400 REGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPR 464

  Fly  1548 PPNCEPRLYEIMLECWHKDPMRRPTFETLQWKLEDFYTSDQSDYKE 1593
            ..||...||:||..||.:....||||:.||..|:||||:.:..|::
Mouse   465 MENCPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEGQYQQ 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 48/95 (51%)
PTKc_Frk_like 1319..1587 CDD:270653 163/267 (61%)
Pkinase_Tyr 1328..1580 CDD:285015 152/251 (61%)
LynNP_001104566.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45
SH3_Lyn 67..122 CDD:212937 8/37 (22%)
SH2_Src_Lyn 125..225 CDD:198227 48/99 (48%)
PTKc_Lyn 239..510 CDD:270657 163/272 (60%)
Pkinase_Tyr 247..497 CDD:285015 152/251 (61%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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