DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src42A and frk

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:XP_002938349.1 Gene:frk / 100488362 XenbaseID:XB-GENE-492884 Length:517 Species:Xenopus tropicalis


Alignment Length:512 Identity:262/512 - (51%)
Similarity:345/512 - (67%) Gaps:27/512 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly  1107 NCLQVVSSTTSRQPLRRWSN-------QTPLKCTCHPATEELP--LTAIEKSRSLPAACSASCSH 1162
            :||..|.....::..|..||       |.|:..|.....:..|  :...|:.|:...|..:....
 Frog    10 SCLSCVLPCVFKEEKRSGSNSFNGIVIQNPVITTQLDGPQVPPRFVNQGEQQRNSYVALYSYEGR 74

  Fly  1163 TCAHLS--------VIDQSPATTKCFGKTSLTTAKKGKSRRLSEF---TRGEFLNEKSWYFRKIK 1216
            |...||        :||.:.|:   :.|..|... :||:.....|   .....:....|:|:.||
 Frog    75 TPDELSFKAGDQMLIIDTTHAS---WWKAKLLRT-RGKAEGYVPFNYVAPVSSIESMPWFFKDIK 135

  Fly  1217 RIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIRQLDEGGFFIARRTTFRTLQ 1281
            |.|||:.|:.|.|..|:||||:|||:..:|||||.||..|||||:|:||:|||:|..::.|.::.
 Frog   136 RSEAERLLVRPGNTTGSFLIRESESQKGEYSLSVFDGIAVKHYRLRKLDDGGFYITSKSKFVSMN 200

  Fly  1282 ELVEHYSKDSDGLCVNLCKPCVQIEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGL 1346
            ||||:|.|..:|||..|.|||:....|:...|.:.|.|.|||:|.||||::|||.||||:|||||
 Frog   201 ELVEYYGKREEGLCCKLLKPCITTGIPLPPDLCYHTADHWEINRNSLKFLKKLGQGQFGEVWEGL 265

  Fly  1347 WNNTTPVAIKTLKSGTMDPKDFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEY 1411
            ||||.||||||||:|||:|:|||.|||.||.|||.|||||.||||:|||:|||||||:|||||.|
 Frog   266 WNNTIPVAIKTLKTGTMNPQDFLREAQFMKNLRHPKLIQLQAVCTLEEPVYIITELMRHGSLLSY 330

  Fly  1412 LQAIAGKGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIK 1476
            ||  ...|.|:.:...:|||||:|:||||||:|::|||||||||||||:..:.|:|||||||:.|
 Frog   331 LQ--NDNGTSIHIPNQVDMAAQVASGMAYLETQSFIHRDLAARNVLVGENGVYKVADFGLARVFK 393

  Fly  1477 -EDEYEARVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVE 1540
             ||.|||:...:.|:|||||||..|::|:||||||:||||:.|:||||::||||:|..:.|.::|
 Frog   394 GEDVYEAKNDTKLPLKWTAPEAIRYNRFTIKSDVWAFGILIFEIVTYGKMPYPGLTGRQALDKLE 458

  Fly  1541 HGYRMPQPPNCEPRLYEIMLECWHKDPMRRPTFETLQWKLEDFYTSDQSDYKEAQAY 1597
            :|||:|:|.||...||:||||||:..|..|||||||||||||::.:|.|.|.||..:
 Frog   459 NGYRIPKPFNCPHDLYKIMLECWNAKPEERPTFETLQWKLEDYFETDPSSYLEANNF 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 49/90 (54%)
PTKc_Frk_like 1319..1587 CDD:270653 178/268 (66%)
Pkinase_Tyr 1328..1580 CDD:285015 168/252 (67%)
frkXP_002938349.1 SH3_Src_like 65..117 CDD:212779 12/55 (22%)
SH2 125..220 CDD:387587 49/94 (52%)
PTKc_Frk_like 238..505 CDD:270653 178/268 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 361 1.000 Domainoid score I953
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48065
Inparanoid 1 1.050 569 1.000 Inparanoid score I1053
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 1 1.000 - - oto102859
Panther 1 1.100 - - LDO PTHR24418
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3556
SonicParanoid 1 1.000 - - X5849
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.100

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