DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src42A and abl2

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:XP_002937405.1 Gene:abl2 / 100487790 XenbaseID:XB-GENE-6459814 Length:1100 Species:Xenopus tropicalis


Alignment Length:647 Identity:228/647 - (35%)
Similarity:316/647 - (48%) Gaps:143/647 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   952 GKSVQEQG--APKSNKPNKMRRLSNILSYSRNSGEDQQETTGKEETKPK-------RTQAKRR-- 1005
            |:.|...|  ||.:.:|::         .:|.||           |||.       .|.::||  
 Frog     2 GQQVGRVGGEAPSAQQPHR---------GARGSG-----------TKPSAHVGNIAATSSRRREA 46

  Fly  1006 IGVTNLLLPLDSEELYTRIIAQQRGLDKEHSQEPEEKCASEEQMCTRNALTKSSSLDAISLSVAI 1070
            .|.||       .|....|..|...|.:.:..:.|.:           |||     |||      
 Frog    47 TGRTN-------PETGFNIFTQHEALHRPYGSDSEPQ-----------ALT-----DAI------ 82

  Fly  1071 SPASSPSPPRPRRSLKQHRCLQQHQQTPLAKKHSLDNCLQVVSSTTSRQPLRRWSNQTPLKCTCH 1135
                                                                |||::..|     
 Frog    83 ----------------------------------------------------RWSSKENL----- 90

  Fly  1136 PATEELPLTAIEKSRSLPAAC---SASCSHTCAHLSVIDQSPATTKCF---GKTSLTTAKKGKSR 1194
                   |.|.|...:|..|.   .||..:|   ||:.........|:   |:.....:|.|:..
 Frog    91 -------LGATESDPNLFLALYDFVASGDNT---LSITKGEKLRVLCYNQNGEWCEVLSKNGQGW 145

  Fly  1195 RLSEF-TRGEFLNEKSWYFRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKH 1258
            ..|.: |....|.:.|||...:.|..||  .||....:|:||:|:|||.....|:|:|....|.|
 Frog   146 VPSNYITPVNSLEKHSWYHGPVSRSAAE--YLLSSLINGSFLVRESESSPGQLSISLRYEGRVYH 208

  Fly  1259 YRIRQLDEGGFFIARRTTFRTLQELVEHYSKDSDGLCVNLCKPCVQIEKPVTEGLSHRTRDQWEI 1323
            |||....:|..::...:.|.||.|||.|:|..:|||...|..|..:..||...|:| ...|:||:
 Frog   209 YRINTASDGKVYVTAESRFNTLAELVHHHSTVADGLVTILHYPAPKCNKPTVYGVS-PIHDKWEM 272

  Fly  1324 DRTSLKFVRKLGSGQFGDVWEGLWN--NTTPVAIKTLKSGTMDPKDFLAEAQIMKKLRHTKLIQL 1386
            :||.:....|||.||:|:|:.|:|.  |.| ||:||||..||:.::||.||.:||:::|..|:||
 Frog   273 ERTDITMKHKLGGGQYGEVYVGVWKKYNLT-VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQL 336

  Fly  1387 YAVCTVEEPIYIITELMKHGSLLEYLQAIAGKGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDL 1451
            ..|||:|.|.||:||.|.:|:||:||:..  ....:....|:.||.||::.|.|||.:|:|||||
 Frog   337 LGVCTLEPPFYIVTEYMHYGNLLDYLREC--NREEVTAVVLLYMATQISSAMEYLERKNFIHRDL 399

  Fly  1452 AARNVLVGDGNIVKIADFGLARLIKEDEYEARVGARFPIKWTAPEAANYSKFSIKSDVWSFGILL 1516
            ||||.|||:.::||:|||||:||:..|.|.|..||:|||||||||:..|:.||||||||:||:||
 Frog   400 AARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLL 464

  Fly  1517 TELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYEIMLECWHKDPMRRPTF-ETLQ 1577
            .|:.|||..||||:..::|...:|.||||.||..|.|::||:|..||..:|..||:| ||.|
 Frog   465 WEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWQWNPSDRPSFSETHQ 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 35/90 (39%)
PTKc_Frk_like 1319..1587 CDD:270653 137/262 (52%)
Pkinase_Tyr 1328..1580 CDD:285015 132/253 (52%)
abl2XP_002937405.1 SH3_Abl 100..153 CDD:212784 12/55 (22%)
SH2_ABL 158..251 CDD:198189 36/94 (38%)
PTKc_Abl 270..532 CDD:270645 136/260 (52%)
F_actin_bind 984..1100 CDD:385063
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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