DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Src42A and mst1ra

DIOPT Version :10

Sequence 1:NP_001400996.1 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1606 Species:Drosophila melanogaster
Sequence 2:XP_005166175.1 Gene:mst1ra / 100002448 ZFINID:ZDB-GENE-071218-2 Length:1356 Species:Danio rerio


Alignment Length:408 Identity:125/408 - (30%)
Similarity:197/408 - (48%) Gaps:49/408 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1213 RKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIRQLDEGGF----FIAR 1273
            :|.|....|.:|.:..|...|          .:|..| .|||    ||...:...|.    |...
Zfish   954 KKKKAALVEVRLSMHSNRTTA----------ENYDRS-PDGD----YRRETVRPAGLSVSPFHGS 1003

  Fly  1274 RTTFRTLQELVEHYSKDSDGLCVNLCKPCVQTNSF-SGVFEIEKPVTEGLSHRTRDQWEIDRTSL 1337
            .|||.:|.     |:...|.....|.:..|..::. ..:.|..|.|.  :|.        |:..:
Zfish  1004 GTTFTSLP-----YAGSMDSAAAPLMRRQVSMSALRPDLLEEVKNVL--ISP--------DKIKI 1053

  Fly  1338 KFVRKLGSGQFGDVWEGLW----NNTTPVAIKTLKSGT--MDPKDFLAEAQIMKKLRHTKLIQLY 1396
            :..:.:|.|.||.|:.|..    |..|..|:|:|...|  .:.:.||.|...||...|:.::.|.
Zfish  1054 QHEQIIGKGHFGTVYHGYLTDSDNKETHCAVKSLNRITDLEEVEQFLREGLFMKAFHHSHVLSLL 1118

  Fly  1397 AVCTVEEPI-YIITELMKHGSLLEYLQAIAGKGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDL 1460
            .:....:.: .:|...||||.|..::::   ..||..::.||....|:|.||.||.::.::||||
Zfish  1119 GIVLPSDGLPLVILPYMKHGDLRHFIRS---PERSPTVKDLIGFGLQVAKGMEYLANKKFVHRDL 1180

  Fly  1461 AARNVLVGDGNIVKIADFGLARLIKEDEY---EARVGARFPIKWTAPEAANYSKFSIKSDVWSFG 1522
            ||||.::.:...||:||||:||.:.:.||   :....|:.|:||.|.|:....||:.||||||:|
Zfish  1181 AARNCMLDESFTVKVADFGMARDVYDKEYYSIQDSKKAKLPVKWMALESLQTQKFTTKSDVWSYG 1245

  Fly  1523 ILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQPPNCEPRLYEIMLECWHKDPMRRPTFETLQW 1587
            :|:.||:|.|..|||.:...::...:..|.|:|||..|...|:.::::|||.:|.:||.|.||..
Zfish  1246 VLMWELLTRGASPYPDVDPYDITPYLMQGRRLPQPQYCFDSLWSVLMQCWHPEPEKRPGFTTLVQ 1310

  Fly  1588 KLEDFYTS-DQSDYKEAQ 1604
            .::|.::| |...|...|
Zfish  1311 AVQDIHSSLDGEHYINLQ 1328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_001400996.1 SH2_Src_Src42 1210..1301 CDD:198233 22/91 (24%)
PTKc_Frk_like 1328..1596 CDD:270653 95/278 (34%)
mst1raXP_005166175.1 Sema_MET_like 41..504 CDD:200509
PSI 507..549 CDD:396154
IPT 550..654 CDD:472823
IPT_plexin_repeat2 655..740 CDD:238584
IPT 742..828 CDD:214657
PTKc_Met_Ron 1057..1318 CDD:270649 93/263 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.