DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src42A and abl1

DIOPT Version :9

Sequence 1:NP_610191.2 Gene:Src42A / 35524 FlyBaseID:FBgn0264959 Length:1597 Species:Drosophila melanogaster
Sequence 2:XP_005172104.1 Gene:abl1 / 100000720 ZFINID:ZDB-GENE-100812-9 Length:1081 Species:Danio rerio


Alignment Length:439 Identity:193/439 - (43%)
Similarity:262/439 - (59%) Gaps:29/439 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly  1181 GKTSLTTAKKGKSRRLSEFTRGEF----------------------LNEKSWYFRKIKRIEAEKK 1223
            |..:|:..|..|.|.|.....||:                      |.:.|||...:.|..||  
Zfish    90 GDNTLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVNSLEKHSWYHGPVSRNAAE-- 152

  Fly  1224 LLLPENEHGAFLIRDSESRHNDYSLSVRDGDTVKHYRIRQLDEGGFFIARRTTFRTLQELVEHYS 1288
            .||....:|:||:|:|||.....|:|:|....|.||||....:|..:::..:.|.||.|||.|:|
Zfish   153 YLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKLYVSSESRFNTLAELVHHHS 217

  Fly  1289 KDSDGLCVNLCKPCVQIEKPVTEGLSHRTRDQWEIDRTSLKFVRKLGSGQFGDVWEGLWNN-TTP 1352
            ..||||...|..|..:..||...|:| ...|:||::||.:....|||.||:|:|:||:|.. :..
Zfish   218 TVSDGLITTLHYPAPKRNKPTIYGVS-PNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT 281

  Fly  1353 VAIKTLKSGTMDPKDFLAEAQIMKKLRHTKLIQLYAVCTVEEPIYIITELMKHGSLLEYLQAIAG 1417
            ||:||||..||:.::||.||.:||:::|..|:||..|||.|.|.|||||.|.||:||:||:..  
Zfish   282 VAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTHGNLLDYLREC-- 344

  Fly  1418 KGRSLKMQTLIDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDEYEA 1482
            ..:.:....|:.||.||::.|.|||.:|:|||||||||.|||:.|:||:|||||:||:..|.|.|
Zfish   345 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENNLVKVADFGLSRLMTGDTYTA 409

  Fly  1483 RVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRIPYPGMTNAEVLTQVEHGYRMPQ 1547
            ..||:|||||||||:..|:|||||||||:||:||.|:.|||..||||:..::|...:|..|||.:
Zfish   410 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMDR 474

  Fly  1548 PPNCEPRLYEIMLECWHKDPMRRPTF-ETLQWKLEDFYTSDQSDYKEAQ 1595
            |..|..::||:|..||..:|..||:| ||.|.....|..|..||..|.:
Zfish   475 PEGCPEKVYELMRACWRWNPAERPSFAETHQAFETMFQESSISDEVEKE 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src42ANP_610191.2 SH2_Src_Src42 1210..1301 CDD:198233 36/90 (40%)
PTKc_Frk_like 1319..1587 CDD:270653 138/269 (51%)
Pkinase_Tyr 1328..1580 CDD:285015 132/253 (52%)
abl1XP_005172104.1 SH3_Abl 79..132 CDD:212784 8/41 (20%)
SH2_ABL 137..230 CDD:198189 37/94 (39%)
PTKc_Abl 249..511 CDD:270645 136/263 (52%)
Pkinase_Tyr 256..507 CDD:285015 132/252 (52%)
FABD 958..1081 CDD:197885
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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