DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and PRP2

DIOPT Version :9

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_014408.1 Gene:PRP2 / 855745 SGDID:S000005294 Length:876 Species:Saccharomyces cerevisiae


Alignment Length:802 Identity:227/802 - (28%)
Similarity:358/802 - (44%) Gaps:129/802 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 NKKSASKSCALSLVRQLFHLNVIEPFSGTLKKKKDEQLKPYPVKLSPNLINKIDEVI-------- 279
            :|::..|:.||.|.|..:..|.:  ||.|.:..:...||...:. |....:|.||.|        
Yeast    39 DKEAKDKNSALQLKRSRYDPNKV--FSNTNQGPEKNNLKGEQLG-SQKKSSKYDEKITSNNELTT 100

  Fly   280 -KGL-----------------DLPVVNP-RNIKIELDGPPIPLIVNLSRIDSSQQ-----DGEKR 320
             |||                 ::.|.:. :|.| |:|.      :|..|:...||     .|:..
Yeast   101 KKGLLGDSENETKYASSNSKFNVEVTHKIKNAK-EIDK------INRQRMWEEQQLRNAMAGQSD 158

  Fly   321 QESSVIPWAPPQANWNTWHACNIDEGELATTSIDDL----SMDYERSLRDRRQNDNEYRQFL--- 378
            ....:......:.::.......||    .|...|||    .:.||..|  .:..:.|.::.|   
Yeast   159 HPDDITLEGSDKYDYVFDTDAMID----YTNEEDDLLPEEKLQYEARL--AQALETEEKRILTIQ 217

  Fly   379 EFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYANIYVTQPRR 443
            |.|:.||:...:.|:|..|..|.|:||.|.||.|||||:.||:::|...  ..|...|.:|||||
Yeast   218 EARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFT--DQGKLQIAITQPRR 280

  Fly   444 ISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKL--EAGLRGVSHIIV 506
            ::|.|||.|||.|....||..|||.:|||.........:.:.|.|:|||:.  ::.|...|.|::
Yeast   281 VAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMI 345

  Fly   507 DEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFL 571
            ||.|||.:.:|.|:.:|:|::...|.|.:::.|||::..|||::|..||:..||||.:||     
Yeast   346 DEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPV----- 405

  Fly   572 EDIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSESDVS 636
                                                :|:|....|..|               :.
Yeast   406 ------------------------------------DIHYTLQPEANY---------------IH 419

  Fly   637 FELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQN--TNIFGDTSQYQILPCHSQIPRDEQ 699
            ..:.....:| .::::||.|||||.|...|......|:.  :.:...|.|..|.|.::.:|:::|
Yeast   420 AAITTIFQIH-TTQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQ 483

  Fly   700 RKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQ 764
            .|:|:|.||...|::|:|||||||:|||.|.:|||....:...:.....:|...||..|:.:::|
Yeast   484 LKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQ 548

  Fly   765 RKGRAGRVRPGFCFTLCSR-ARFQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPP 828
            |.||||||.||.||.:.:: :....||....||:.||.|....|.  ||.||.........::.|
Yeast   549 RAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLL--LLSLGVTDLIKFPLMDKP 611

  Fly   829 PVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVF-GCADLMAIMASYSS 892
            .:..:.::...|..:..|::...:|.||:::...|.||...|::...|.. .|..::....:..|
Yeast   612 SIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVS 676

  Fly   893 TFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTM 957
            ...|..||.|||:|.| ....||..: |||:..:.....||..|     ....:|....:|..||
Yeast   677 MLHETPSLFIGQKRDA-AASVLSEVE-SDHILYLEIFNQWRNSK-----FSRSWCQDHKIQFKTM 734

  Fly   958 NVIWDAKQQLLDLLQQAGFPEE 979
            ..:.:.:.||....::.|..|:
Yeast   735 LRVRNIRNQLFRCSEKVGLVEK 756

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM 4..68 CDD:214634
DSRM 170..240 CDD:214634 6/16 (38%)
DEXDc 393..569 CDD:214692 74/177 (42%)
DEXDc 402..542 CDD:238005 58/141 (41%)
ATP-synt_B <584..644 CDD:304375 4/59 (7%)
Helicase_C 643..772 CDD:278689 48/130 (37%)
HA2 842..926 CDD:214852 24/84 (29%)
OB_NTP_bind 974..1078 CDD:285018 2/6 (33%)
PRP2NP_014408.1 PTZ00121 <7..174 CDD:173412 30/144 (21%)
HrpA 185..876 CDD:224557 194/642 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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