DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and PRP16

DIOPT Version :9

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_013012.3 Gene:PRP16 / 853961 SGDID:S000001794 Length:1071 Species:Saccharomyces cerevisiae


Alignment Length:1132 Identity:292/1132 - (25%)
Similarity:474/1132 - (41%) Gaps:263/1132 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IEPKFDIRQTGPK-------NRQRFLCEVRVEPNTYIGVGNSTNKKDAEKNACRDFVNYLVRVGK 73
            ::.|.:...||||       .|::|..::.::.|. ..:.:...||.|...      ....|:.|
Yeast    69 LKNKSEEDSTGPKKIAPSINKRKKFKIQLDLDDNE-DELDSPVQKKPAPTR------TLFKRIDK 126

  Fly    74 LNTNDV----PADAGASGGGPRTGLEGAGMAGGSGQQKRVFDGQSGPQDLGEAYRPLNHDGGDGG 134
            |....:    |.....|              ..|.||.:  :|.:..:|    |.|         
Yeast   127 LKAKQLRQYSPTVKDPS--------------PNSEQQTQ--NGHAETKD----YEP--------- 162

  Fly   135 NRYSVIDRIQEQRDMNEAEAFDVNAAIHGNWTIENAKE------RLNIYKQTNN---IRDDYKYT 190
            .|..|::..:|..|         |...:||...|...|      .|.:.:..:|   :|:..:..
Yeast   163 TRSEVVEEDREWYD---------NDDDYGNLVPEPLSELPEEAKLLPVIRNIDNDDALRNTVQLY 218

  Fly   191 PVGP-----EHARSFLAELSIYVPALNRTVTARESGSNKKSASKSCALSLVRQLFHLNVIEPFSG 250
            |: |     |....||::.::.    |:..|:...||..:::|:..|||:|...  .|....||.
Yeast   219 PI-PLKQRMEWIPPFLSKFALE----NKVPTSIIIGSISETSSQVSALSMVNPF--RNPDSEFSA 276

  Fly   251 TLKKKKDEQLKPYPVKLSPNLINKIDEVIKGLDLPVVNPRNIKIELDGPPIPLIVNLSRIDSSQQ 315
            ..|:..                       |.:.|..:|..:|:...|...: |...:..:...:.
Yeast   277 NAKRGS-----------------------KLVALRRINMEHIQQSRDNTTV-LNTAMGEVLGLEN 317

  Fly   316 DGEKRQESSVIPWAPPQANWNTWHACNIDEGELATTSIDDLSMDYERSLRDRRQNDNEYRQFLEF 380
            :.:.:.:|:             ...|  |:..|.|.|.||:.                     ..
Yeast   318 NNKAKDKSN-------------QKIC--DDTALFTPSKDDIK---------------------HT 346

  Fly   381 REKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYAN-----IYVTQ 440
            :|:||:...||::|:.|.:|.||:|.|.||.|||||:|||:.::       ||||     |.|||
Yeast   347 KEQLPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEE-------GYANDRGKSIVVTQ 404

  Fly   441 PRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRK--LEAGLRGVSH 503
            |||::|||||:|||.|....||..||||:|||.|.......:.|.|.|:|||:  |:..|...|.
Yeast   405 PRRVAAISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSC 469

  Fly   504 IIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQ 568
            :|:||.|||.:|:|.||...:.::....||.:|:.|||::..|||.:||..|...:|||.||||.
Yeast   470 VIIDEAHERSLNTDILLGFFKILLARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGRTFPVQT 534

  Fly   569 FFLEDIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSES 633
            .:..:.:|  |:|.:|.|                                               
Yeast   535 IYTSNPVQ--DYVEAAVS----------------------------------------------- 550

  Fly   634 DVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALM-----KFLQ------NTNIFGDTSQYQI 687
                   :|:.:|:.:....|.||:|:.|...|....     ||||      .|..|.:.:..:|
Yeast   551 -------QAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFEEINDIEI 608

  Fly   688 LPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSY 752
            ||.:|.:|.|.|.|:|:.:.....|||::|||||||:||..|.:|||...:::|::.....|.|.
Yeast   609 LPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLDSL 673

  Fly   753 ATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALED---NLTPEMFRTPLHEMALTIKLLRL 814
            .....||.|.:||.|||||..||..:.|.:...|:  ||   ...||:.||.|....|.:|.|  
Yeast   674 VITPISKANADQRSGRAGRTAPGTAYRLYTEDTFK--EDMYLQTIPEIQRTNLSNTLLLLKSL-- 734

  Fly   815 GSIHHFLSK--ALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAV 877
             .:...|||  .::.||:...:.:...|..:..:|.:.:|||||..:|:.|::|.|.|::::...
Yeast   735 -DVTDELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQPSLSKILLIAVR 798

  Fly   878 FGCADLMAIMASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWRREKQRGEHM 942
            .||:|.|..:.|..|. .:||.....:::.|:..:.......|||:.::...:.|     |..:.
Yeast   799 NGCSDEMLTIVSMLSV-PQVFYRPKERQKEADIARNKFFIAKSDHLTLLNVFEQW-----RANNF 857

  Fly   943 EARFCDWKGLQMSTMNVIWDAKQQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLG 1007
            .:.:|:...:|..::....|.:.|||.:|:....|   :||       .|.|  .|:....:|.|
Yeast   858 SSHWCNKHFVQYKSLVRARDIRDQLLTILKSQKIP---VIS-------SGKD--WDIIKKCICSG 910

  Fly  1008 LYPNICVHKEKRKVLTTESKAAL-LHKTSV--NCSNLAVTFPYPFFVFGEKIRT--RAVSCKQLS 1067
            ...........|..:..::..:: ||.||.  ...:|.     |:.|:.|.:.|  ..:.|  ::
Yeast   911 FAHQAAKITGLRNYVHLKTGVSVQLHPTSALHGLGDLP-----PYVVYHELLMTSKEYICC--VT 968

  Fly  1068 MVSPLQVILFGSRKIDLAANNIVRVDN 1094
            .|.|..::.:|....|     |.|:.|
Yeast   969 SVDPFWLMEYGGLLYD-----IKRIKN 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM 4..68 CDD:214634 11/58 (19%)
DSRM 170..240 CDD:214634 18/83 (22%)
DEXDc 393..569 CDD:214692 85/182 (47%)
DEXDc 402..542 CDD:238005 68/146 (47%)
ATP-synt_B <584..644 CDD:304375 3/59 (5%)
Helicase_C 643..772 CDD:278689 50/139 (36%)
HA2 842..926 CDD:214852 23/83 (28%)
OB_NTP_bind 974..1078 CDD:285018 21/108 (19%)
PRP16NP_013012.3 HrpA 319..1071 CDD:224557 233/806 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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