DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and FAS4

DIOPT Version :10

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_174605.1 Gene:FAS4 / 840232 AraportID:AT1G33390 Length:1237 Species:Arabidopsis thaliana


Alignment Length:1172 Identity:275/1172 - (23%)
Similarity:452/1172 - (38%) Gaps:334/1172 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 IENAKERLNIYKQTNNIRDDYKYTPVGPEHARSFLAELSIYVPALNRTVTARESGSNKKSASKSC 231
            :|..||:..::.:|..:.|.||.:    |...|.|....:    :.|:.|..|........||  
plant    66 LEEDKEKEILFSKTAELLDKYKIS----EDVSSLLQSSKV----IGRSATKLEKRRRAMQLSK-- 120

  Fly   232 ALSLVRQLFHLNVIEPFSGTLKKKKDEQLKPYPVKLSPNLINKIDEVIKGLDLPVVNPRNIKIEL 296
                             :|...:..||.::.          |..|: ...:|.| ..|.:::||.
plant   121 -----------------AGVETEHSDESVEQ----------NDNDD-DSCMDEP-TTPEHVEIET 156

  Fly   297 DGPPI-----PLIVNLSRIDSSQQDGEKRQESSVIPWAPPQANWNTWHACNIDEGELATTSIDDL 356
              |..     ..:|:...:.|:::...|.:....:...|       ...|..|:.:    |:|.|
plant   157 --PTFVTDSEQQLVHADLMISAEESSSKLEVDDTVDMIP-------LTTCRDDDED----SMDGL 208

  Fly   357 SMDYERSLRDRR-----QNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQ 416
            ..:.:.:::..|     .:.:...:..|.|:.|||..|..||:.|||.:|.|||.|.||||||||
plant   209 IENEDVTVQGPRVPAFVVHVSRPAEVEETRKDLPIVMMEQEIMEAINRHPAVIISGQTGCGKTTQ 273

  Fly   417 IAQYILDDYICSGQGGYAN--IYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPY 479
            :.|::.:....|.|....:  |.:|||||::.::.|:|||.|...:||..||:.||::..... .
plant   274 VPQFLYEAGFGSKQFSSRSGIIGITQPRRVAVLATAKRVAFELGVRLGKEVGFQVRYDKKIGE-N 337

  Fly   480 GAILFCTVGVLLRKLEAG--LRGVSHIIVDEIHERDVNSDFLLVILRDMV----DTYPD------ 532
            .:|.|.|.|:|||:::..  ||..|.||:||.|||.:|:|.|:.:|..::    :.|.:      
plant   338 SSIKFMTDGILLREIQNDFLLRRYSVIILDEAHERSLNTDILIGMLTRVIKIRQEYYEEQQKSLQ 402

  Fly   533 -------------LHVILMSATIDTTKF---SKYF-GICPVLEVPGRAFPVQQFFLEDIIQMTDF 580
                         |.:||||||:....|   .:.| .|.|::|||.|.:||...|.:. .::.|:
plant   403 SGGTVTSECQITPLKLILMSATLRVEDFVSGKRLFPNIPPLIEVPTRQYPVTIHFSKK-TEIVDY 466

  Fly   581 VPSA------------------------------ESRRK----------------RKEVED---- 595
            :..|                              |..||                :|:.:|    
plant   467 IGEAYKKVMSIHKKLPQGGILVFVTGQREVDYLCEKLRKSSKELVVQAAKRDAYVKKKCDDGSFG 531

  Fly   596 ------------------EEQLLSEDKDEAEI---NYNKVC--EDKY-SQKTRN--------AMA 628
                              ..:..|..:|.::|   ||:...  ||.| |.:.|:        |.:
plant   532 GVDMKEIAEAFDDDSNNQNSRFSSHGEDPSDIGDGNYDDDFEEEDMYESDEDRDWETVDDGFASS 596

  Fly   629 MLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQ 693
            .:.|.  ..:.|.|....:..||  |::.. .|..::.....:..|..|.| ...:.::||.::.
plant   597 FVEEG--KLDALRAAFNALADKN--GSVSA-EPAKSIAAENQEAEQVKNKF-SPGKLRVLPLYAM 655

  Fly   694 IPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWAS 758
            :....|.:|||.|.:....::::||:||||:||..|.:|:|..:.::|.:.|...:.||...|.|
plant   656 LSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPGIKYVVDTGRVKVKNYDSKTGMESYEVDWIS 720

  Fly   759 KTNLEQRKGRAGRVRPGFCFTLCSRARFQAL-EDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLS 822
            :.:..||.|||||..||.|:.|.|.|.|..: |::..||:.:.|:..:.|.:|.:.:..:.:|..
plant   721 QASASQRAGRAGRTGPGHCYRLYSSAVFSNIFEESSLPEIMKVPVDGVILLMKSMNIPKVENFPF 785

  Fly   823 KALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMV-------------- 873
            ..  ||...|:.|||..|:.:..||:|..|||||:.::..|:.||..:|::              
plant   786 PT--PPEPSAIREAERCLKALEALDSNGGLTPLGKAMSHYPMSPRHSRMLLTVIQMLKETRNYSR 848

  Fly   874 LGAVFGCADLMAIMASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWRREKQR 938
            ...:.|.|  :|.:|:.|.....:...: |:::  |..|....|         |..:..:|:|.|
plant   849 ANLILGYA--VAAVAALSLPNPLIMEFE-GEKK--NESKDADKT---------VKQEDKQRKKDR 899

  Fly   939 GEHMEAR-----------------------------FCDWKGLQMSTMNVIWDAKQQLLDLLQQA 974
            .|.::|.                             ||:..||.:.||:.:...|.|||.|:...
plant   900 KEKIKAARDRFSNPSSDALTVAYALHSFEVSENGMGFCEANGLHLKTMDEMSKLKDQLLRLVFNC 964

  Fly   975 GFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNICVHKEKRKVLTTESKAALLHKTSVNCS 1039
            ..|.|...|.........|                    |.|..|...:|.||..||.....   
plant   965 CKPSETEDSFSWTHGTIQD--------------------VEKSWRITTSTSSKTPLLQNEEE--- 1006

  Fly  1040 NLAVTFPYPFFVFGEKI----------RTRAVSCKQLSMVSPLQVILFGSRKIDLAANNIVRVDN 1094
                       :.||.|          :|||...:..::..|                  |.:..
plant  1007 -----------LLGEAICAGWADRVARKTRATEYQACAVQEP------------------VFLHR 1042

  Fly  1095 WLN-FDIEPELAAKIGALKPALEDLITVACDNPSDILRLEEPYAQ---------LVKVVKDLCVK 1149
            |.: .:..|||...                   |::|....||..         |||..|.|||.
plant  1043 WSSLINSAPELLVY-------------------SELLLTNRPYMHGATRVRPEWLVKHAKSLCVF 1088

  Fly  1150 SA 1151
            ||
plant  1089 SA 1090

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM_DHX9_rpt1 2..70 CDD:380683
DSRM_DHX9_rpt2 167..241 CDD:380684 15/73 (21%)
DEXHc_DHX9 326..559 CDD:350730 84/268 (31%)
HrpA 378..>889 CDD:441249 179/638 (28%)
OB_NTP_bind 1002..1079 CDD:400182 15/86 (17%)
FAS4NP_174605.1 HrpA 240..>834 CDD:441249 174/603 (29%)
HA2 797..920 CDD:461295 30/136 (22%)
OB_NTP_bind 1011..1085 CDD:400182 18/110 (16%)
Blue background indicates that the domain is not in the aligned region.

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