DRSC/TRiP Functional Genomics Resources

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Protein Alignment mle and AT4G16680

DIOPT Version :10

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_001329688.1 Gene:AT4G16680 / 827370 AraportID:AT4G16680 Length:796 Species:Arabidopsis thaliana


Alignment Length:710 Identity:216/710 - (30%)
Similarity:330/710 - (46%) Gaps:115/710 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   379 EFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGY---ANIYVTQ 440
            |.||.|||...|.|:|..|.:|.|::|.|.||.||||||.||:       .:.||   ..|..||
plant   130 EGREFLPIHGYREELLKLIEENQVLVIVGETGSGKTTQIPQYL-------QEAGYTKRGKIGCTQ 187

  Fly   441 PRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKL--EAGLRGVSH 503
            |||::|:|||.|||:|...:||..||||:|||...... ..|.:.|.|:|||:|  |..|...|.
plant   188 PRRVAAMSVASRVAQEVGVKLGHEVGYSIRFEDCTSEK-TVIKYMTDGMLLRELLIEPKLDSYSV 251

  Fly   504 IIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQ 568
            ||:||.|||.:::|.|..:::|:....|||.:|:.|||::..|||:||....:..:|||.:||::
plant   252 IIIDEAHERTLSTDILFALVKDVAKVRPDLRLIISSATLEAKKFSEYFDSARIYLIPGRRYPVEK 316

  Fly   569 FFLEDIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSES 633
            .|                                         .|..|..|.:.....:..:.::
plant   317 LF-----------------------------------------RKCPEPDYLETVIRTVVQIHQT 340

  Fly   634 DVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTNIFGDT--SQYQILPCHSQIPR 696
                   ||:          |.|||||.|...|..:...|:...:...|  |:..|.|.:|.:|.
plant   341 -------EAI----------GDILVFLTGQEEIETVETNLKRRMMDLGTKGSEIIICPIYSNLPT 388

  Fly   697 DEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTN 761
            ..|.|||||.|:|..|::|:|||||||:|||.:.:|||....::..:.....:.|......||.:
plant   389 PLQAKVFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESLLVTPISKAS 453

  Fly   762 LEQRKGRAGRVRPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALE 826
            ..||.||:||..||.||.|.:   .:.||....||:.|..|..:.||:|.|.:..:.:|  ..::
plant   454 AAQRAGRSGRTGPGKCFRLYN---IKDLEPTTIPEIQRANLASVVLTLKSLGIQDVFNF--DFMD 513

  Fly   827 PPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYS 891
            |||.:|:::|..||..:..||...|:|.:|..:...|::|.|.||:|....:.|:..:..:|:..
plant   514 PPPENALLKALELLYALGALDEIGEITKVGERMVEFPVDPMLSKMIVGSEKYKCSKEIITIAAML 578

  Fly   892 STFSEVFSLDIGQRRLANHQKA--LSGTK-CSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQ 953
            |..:.||.....|:..|:..:.  ...|: ..||:|::.....|:.     |:...::|..|.:|
plant   579 SVGNSVFYRPKNQQVFADKARMDFYEDTENVGDHIALLRVYNSWKE-----ENYSTQWCCEKFIQ 638

  Fly   954 MSTMNVIWDAKQQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNICVHKEK 1018
            ..:|....|.:.|||.||.:.|          |:...:.:|  ||.....:..|.:|    |..|
plant   639 SKSMKRARDIRDQLLGLLNKIG----------VELTSNPND--LDAIKKAILAGFFP----HSAK 687

  Fly  1019 -------RKVLTTESKAALLHKTSVNCSNLAVTFPYPFFVFGEKIRTRAVSCKQLSMVSP 1071
                   |:|  .|.:...:|..    |.|....|..:.|:.|.:.|.....:..:.:.|
plant   688 LQKNGSYRRV--KEPQTVYVHPN----SGLFGASPSKWLVYHELVLTTKEYMRHTTEMKP 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM_DHX9_rpt1 2..70 CDD:380683
DSRM_DHX9_rpt2 167..241 CDD:380684
DEXHc_DHX9 326..559 CDD:350730 81/184 (44%)
HrpA 378..>889 CDD:441249 174/516 (34%)
OB_NTP_bind 1002..1079 CDD:400182 15/77 (19%)
AT4G16680NP_001329688.1 HrpA 135..>750 CDD:441249 213/705 (30%)
Blue background indicates that the domain is not in the aligned region.

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